BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10m12 (662 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical pr... 28 5.1 U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 27 9.0 U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 27 9.0 >Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical protein K03H1.9 protein. Length = 148 Score = 28.3 bits (60), Expect = 5.1 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 522 PFFHEYNM*LKITLHCSRKLMHKHCSKQLNGFRCLLNNYQLQL 650 PF H M ++T H L+H S + +CLL NY + L Sbjct: 30 PFHHHRKMLWQMTHH---SLLHVTMSGRFQSIQCLLQNYLMTL 69 >U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical protein C01B10.6b protein. Length = 503 Score = 27.5 bits (58), Expect = 9.0 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +2 Query: 314 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 472 ++G QY +C++ G+ TLP P AC + +P+ + IC Q Sbjct: 329 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 382 >U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical protein C01B10.6a protein. Length = 506 Score = 27.5 bits (58), Expect = 9.0 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +2 Query: 314 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 472 ++G QY +C++ G+ TLP P AC + +P+ + IC Q Sbjct: 332 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 385 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,302,823 Number of Sequences: 27780 Number of extensions: 287863 Number of successful extensions: 690 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 690 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1486926498 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -