BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10m12 (662 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g62340.1 68414.m07034 subtilisin-like serine protease / abnor... 29 2.1 At2g28460.1 68415.m03457 DC1 domain-containing protein contains ... 29 2.8 At1g66440.1 68414.m07548 DC1 domain-containing protein contains ... 29 2.8 At1g66920.1 68414.m07605 serine/threonine protein kinase, putati... 29 3.6 At4g38940.1 68417.m05518 kelch repeat-containing F-box family pr... 28 6.4 At5g39880.1 68418.m04837 expressed protein 27 8.4 At4g37680.1 68417.m05329 expressed protein contains Pfam domain,... 27 8.4 >At1g62340.1 68414.m07034 subtilisin-like serine protease / abnormal leaf shape1 (ALE1) identical to subtilisin-like serine protease [Arabidopsis thaliana] GI:16444944 Length = 832 Score = 29.5 bits (63), Expect = 2.1 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 246 QSGPRKAGSYAVVFCILIAFVCVGTAFNTTAAEVAAKGRN 365 ++ PRK SY+ + I+ FV V A + A E KG N Sbjct: 2 ETNPRKLRSYSYICLIVCIFVLVVCAILSRAEEKEGKGEN 41 >At2g28460.1 68415.m03457 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 704 Score = 29.1 bits (62), Expect = 2.8 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Frame = +2 Query: 299 CFCLRRNGLQYDCRRSGCQG--SQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 472 C L + G Y+C + GC+ C T PL +H P + ++CK Sbjct: 490 CIGLCKGGFFYECGKQGCKFMLHVQCATTSEPLVHESHRHPLFLTSKPGEKIRCSVCKDS 549 Query: 473 AKLKNC 490 + NC Sbjct: 550 EETFNC 555 >At1g66440.1 68414.m07548 DC1 domain-containing protein contains Pfam protein PF03107 DC1 domain Length = 726 Score = 29.1 bits (62), Expect = 2.8 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +2 Query: 170 CYYFLEYEYKSH*RFLKMKRSVNCVPVRTSKSRELRGSILYTDCFCLRRNGLQYDCRRSG 349 C + L E + R ++ + + + TS + + L + C L G Y+C R G Sbjct: 469 CNFILHEECANFSRKIQHPIHPHLLTLVTSATDKANTHDLCSACPWLFTTGFFYECHREG 528 Query: 350 CQGS--QLCQTLPRPLCEPAH 406 C+ + C T+ PL +H Sbjct: 529 CRFNLHVRCGTISEPLVHGSH 549 >At1g66920.1 68414.m07605 serine/threonine protein kinase, putative similar to receptor serine/threonine kinase PR55K gi|1235680|gb|AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 Length = 609 Score = 28.7 bits (61), Expect = 3.6 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -2 Query: 97 LVLFLYFEFWKFIKCAFAESSLKFCINHFK 8 LVLFL+F + + CA ++ +L +C + F+ Sbjct: 9 LVLFLFFSLFYHLPCASSKQTLGWCESQFQ 38 >At4g38940.1 68417.m05518 kelch repeat-containing F-box family protein low similarity to SKP1 interacting partner 6 [Arabidopsis thaliana] GI:10716957; contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain Length = 370 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -2 Query: 625 KQRKPFNCLEQCLCISL-REQCNVIFNYILYS*KNGSSF 512 K+R F C EQCL I++ ++Q + I + L NG F Sbjct: 62 KRRSFFGCTEQCLYIAISKDQTSDIHWFTLCRKPNGQQF 100 >At5g39880.1 68418.m04837 expressed protein Length = 363 Score = 27.5 bits (58), Expect = 8.4 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +3 Query: 531 HEYNM*LKITLHCSRKLMHKHCS--KQLNGFRCLLNNYQ 641 H+Y KIT H ++KL H S +N F ++NN + Sbjct: 155 HDYQADAKITAHEAKKLNHAMISFKNSINAFMNVVNNLE 193 >At4g37680.1 68417.m05329 expressed protein contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073) Length = 385 Score = 27.5 bits (58), Expect = 8.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 271 LPAFRGPDWNTVHASLHFEKSLVGFILVL*KVV 173 LP F+ P++ V ASL F G +L K++ Sbjct: 274 LPVFQSPEFRVVRASLFFGMGFSGLAPILHKLI 306 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,069,953 Number of Sequences: 28952 Number of extensions: 251894 Number of successful extensions: 591 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 576 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 591 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1393347168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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