Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m11
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.3  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = -3

Query: 214 NAVNSALFSYISFKFDIALDYCFSKTKKSKQRIYFNDHI---ILSKPK*ELKIKTKSSTS 44
           N  N   FS I F  + A++        SK R  F       I+ K + + +  T+ STS
Sbjct: 330 NYYNILYFSRIMFHINSAVNPILYNIISSKFRSGFFKLCGMKIVKKRRKDKREITRKSTS 389

Query: 43  LETHSTSKRAKQN 5
             TH++S++   +
Sbjct: 390 SSTHTSSQQTSDS 402


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 165 MSNLKEIYEKSAEFTAFYTGGDIQWTNDGLQMLCLCDEAIKV 290
           M  L EIY+   +   FY     +W N     L   D  +KV
Sbjct: 160 MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 201


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 537 LLKQYFHLLNQRLTSQQVLY-GLISKFLVGLQFLCPTF*LGHFC 409
           L+ Q   ++   + S+Q+ +  L+  FLVG+ +    F + H C
Sbjct: 610 LITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFYICHVC 653



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 428  FN*ATFVCSNNTLITM*YFKCINLVIFCIFL 336
            F   TF CSN          C N+++ C++L
Sbjct: 1104 FGLITFGCSNRCFFPSKIRICWNVLLNCVYL 1134


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 224 TCIKCSKLCTFLIYFF 177
           T +K +K C F+I F+
Sbjct: 314 TVLKTNKYCNFIILFY 329


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 410 QKWPN*NVGQRNWSPTKNLEIKP*RTCCEV 499
           +KW    +   NW   K+L+ K   T C +
Sbjct: 290 EKWSRVEMALDNWKNDKSLKRKFYLTICTI 319


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 395 TLITM*YFKCINLVIFC 345
           T ITM +FK I +V +C
Sbjct: 203 THITMAHFKIIQVVPYC 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,628
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)