Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m08
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   2.2  
UniRef50_Q869X2 Cluster: Similar to Anabaena sp. (Strain PCC 712...    34   2.9  
UniRef50_Q177T5 Cluster: Huntingtin interacting protein; n=2; Cu...    33   8.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 654 VDELTAHLVLSGYW 695
           VDELTAHLVLSGYW
Sbjct: 160 VDELTAHLVLSGYW 173


>UniRef50_Q869X2 Cluster: Similar to Anabaena sp. (Strain PCC 7120).
           Polyketide synthase; n=5; Dictyostelium discoideum|Rep:
           Similar to Anabaena sp. (Strain PCC 7120). Polyketide
           synthase - Dictyostelium discoideum (Slime mold)
          Length = 2604

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +1

Query: 259 PFFAST*TSSQCM--AVYLDQISFDKLRLAETSARPIQSI*NILENNETHMLAIFVKGKT 432
           PFF ST T SQ      Y  Q  +D LR+     + I +I N +E NE++  AIF     
Sbjct: 771 PFF-STITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIF----- 824

Query: 433 MLEIGNH 453
            LEIG H
Sbjct: 825 -LEIGPH 830


>UniRef50_Q177T5 Cluster: Huntingtin interacting protein; n=2;
            Culicidae|Rep: Huntingtin interacting protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 2367

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 688  PLNTRWAVSSSTHLSNKKKRRLWNSASTSLSTARRGQE*MEEHSPNKVLRKGHDPQH 518
            PLNT   +    HLS +++R+L+          RR +E   +H  N  L+ G +P H
Sbjct: 1843 PLNTASPMPKMDHLSKQQRRQLFEMKVAHEEAERRNKELWMQHESN-CLKFGLNPHH 1898


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,192,953
Number of Sequences: 1657284
Number of extensions: 11767798
Number of successful extensions: 29333
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28311
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)