Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m07
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 40 0.002
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 31 0.69
U39674-2|AAY86211.1| 94|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 29 3.7
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 29 3.7
U50069-4|AAB37557.1| 355|Caenorhabditis elegans Hypothetical pr... 29 4.8
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 29 4.8
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 28 6.4
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 28 8.5
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 28 8.5
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = +1
Query: 403 MLMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILIIGLSFVMSCSECARKMPCNIVCL 582
M TA+F V+ ++ + + + V I ++ ++ + C R+ P NI+ L
Sbjct: 42 MFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVAIALSCCGNLRRQFPVNIILL 101
Query: 583 VLAVIGMSTIVSFITVHYNTEILMYAMLATAV 678
+ + + + F+T YN + ++ + T V
Sbjct: 102 TIFTLSAAVMTMFVTACYNVQSVLICLCITTV 133
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 481 LVIGIPAMILIIGLSFVMSCSECARKMPCNIVCLVLAVIGMST-IVSFITVHYNTEILMY 657
L++ IP IL L + S A K N++CLV AV + +V+F+ + T +L Y
Sbjct: 13 LIVAIPG-ILFSSLIVYLYVSGFAEKTSFNVICLVRAVNNIIVLVVNFLIFLFPTLLLSY 71
Query: 658 AMLATAV 678
+++ +
Sbjct: 72 NYMSSTL 78
>U39674-2|AAY86211.1| 94|Caenorhabditis elegans Hypothetical
protein C06E2.9 protein.
Length = 94
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 657 IHQDLRVVMHRDERNNCGHSYNR*NKTHNVARHFSGTLRTRHHE 526
+H+ R V H+ N GH ++R +K NV+RHF +HH+
Sbjct: 43 MHRFRRHVEHQKHSLNDGHLHSRNSK--NVSRHFVNDGHAQHHK 84
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Frame = +3
Query: 378 FCVHYSFYNVNVHSIIHRSGVYHARYESVFSKDRLSN--WHTSHDFNYWAEFRDVLFGVC 551
FCV S Y+ ++H + +ES+ D + N W T + +D+
Sbjct: 224 FCVAMSEYD----QVLHEDETTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKI 279
Query: 552 QKNALQHCVSCFSGYRNVHNCFVHHGALQHGDLDVCNAGDRCRCVCLYITGLFQF 716
+K+ L C +SG ++ H + A N C C T QF
Sbjct: 280 KKSPLTICFPEYSGRQDYHEASAYIQAQFEAKNKSANKEIYCHMTCATDTTNIQF 334
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Frame = +3
Query: 378 FCVHYSFYNVNVHSIIHRSGVYHARYESVFSKDRLSN--WHTSHDFNYWAEFRDVLFGVC 551
FCV S Y+ ++H + +ES+ D + N W T + +D+
Sbjct: 224 FCVAMSEYD----QVLHEDETTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKI 279
Query: 552 QKNALQHCVSCFSGYRNVHNCFVHHGALQHGDLDVCNAGDRCRCVCLYITGLFQF 716
+K+ L C +SG ++ H + A N C C T QF
Sbjct: 280 KKSPLTICFPEYSGRQDYHEASAYIQAQFEAKNKSANKEIYCHMTCATDTTNIQF 334
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = +1
Query: 475 IGLVIGIPAMILIIGLSFVMSCSECARKMPCNIVCLVLAVIGMSTIVSFITVHYN----- 639
+ L+ + +++II S S M + + + I + + S++ YN
Sbjct: 18 LSLLFNLVLLVIIIKFSRPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLYT 77
Query: 640 TEILMYAMLATAVVVFVCILLACSNFDFTKWFIY 741
T+ + Y +L+ ++V C + AC + FIY
Sbjct: 78 TQFVEYQLLSQILIVTFCSIFACMQVVLSTQFIY 111
>U50069-4|AAB37557.1| 355|Caenorhabditis elegans Hypothetical
protein C09B9.1 protein.
Length = 355
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 562 PCNIVCLVLAVIG-MSTIVSFITVHYNTEILMYAMLATAVVVFVCILLACSNFDFTKWFI 738
P N++CL+L ++ I++++ +L + VV +C L F + FI
Sbjct: 166 PTNMICLILQIVPFFICILNYVATLNGAAVLKVLAATSRVVTLICFLAI-----FIQIFI 220
Query: 739 YVIVXSTGIP 768
++V +P
Sbjct: 221 SIVVAMRELP 230
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Frame = +3
Query: 378 FCVHYSFYNVNVHSIIHRSGVYHARYESVFSKDRLSN--WHTSHDFNYWAEFRDVLFGVC 551
FCV S Y+ ++H + +ES+ D + N W T + +D+
Sbjct: 224 FCVAMSEYD----QLLHEDETTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKI 279
Query: 552 QKNALQHCVSCFSGYRNVHNCFVHHGALQHGDLDVCNAGDRCRCVCLYITGLFQF 716
+K+ L C +SG ++ H + A N C C T QF
Sbjct: 280 KKSPLTICFPEYSGRQDYHEASAYIQAQFEAKNKSANKEIYCHMTCATDTTNIQF 334
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 58 KKIRTMPKDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTE-N 234
K+ + + E + + + E + T++E + N I ++ G+ + T N
Sbjct: 24 KRTASTVEGTEAKQMRGDTENRSDGEMDDVSTSSEIRHGNGFIENFRSQTGNSSRTTATN 83
Query: 235 ERKNPSIVVYQFYGAQNQNDWGMSGGN 315
ER +V+ F NQND M N
Sbjct: 84 ERIKKKLVIKNFKANANQNDVAMGDTN 110
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 76 PKDKEINENSN--EVQENRITEHSNEDTANERKSQN-NEIHIDMTRLGDDVKGTENERKN 246
PK+KE N +S + Q N HSN + N++ +N N H + + G T N
Sbjct: 183 PKEKEKNTHSGNRQSQVNHNHHHSNHVSGNQQNRKNKNRDHSNQSYRGG---YTHNHNNY 239
Query: 247 PSIVVYQFYGAQNQNDWGMSGGNAFDNGAPPLEYDP 354
S+ + G + + S G + APP+ P
Sbjct: 240 HSLENAKSSGFLSNSSLS-SAGQISASSAPPVSTTP 274
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +1
Query: 76 PKDKEINENSN--EVQENRITEHSNEDTANERKSQN-NEIHIDMTRLGDDVKGTENERKN 246
PK+KE N +S + Q N HSN + N++ +N N H + + G T N
Sbjct: 183 PKEKEKNTHSGNRQSQVNHNHHHSNHVSGNQQNRKNKNRDHSNQSYRGG---YTHNHNNY 239
Query: 247 PSIVVYQFYGAQNQNDWGMSGGNAFDNGAPPLEYDP 354
S+ + G + + S G + APP+ P
Sbjct: 240 HSLENAKSSGFLSNSSLS-SAGQISASSAPPVSTTP 274
>Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical
protein T19B10.4a protein.
Length = 243
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = +1
Query: 94 NENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTR----LGDDVKGTENERKNPSIVV 261
N+ Q N+ ++ N N+ + + + M +G G P+ +
Sbjct: 34 NQKKGNNQNNKNNKNQNGGNRNQNRQHHQPPMMQMVPPFGPMGPGGPGGPGFMGPPNGNM 93
Query: 262 YQFYGAQNQNDWGMSGGNAFDNGAPPLEYDPKTRND 369
F G +N G + GN NGAPP Y+ + N+
Sbjct: 94 NFFNGQNRRNGSGKNNGNR--NGAPPSGYNGPSANN 127
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 58 KKIRTMPKDKEINENS-NEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTE 231
K+ T + +EIN+++ NE+ + I++ S + + NE+ + R+ + V G E
Sbjct: 457 KETETFEEKREINKSATNELTDMEISKFSKIIATGKNARKWNEMKVQFERIDNIVNGLE 515
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 79 KDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDD 216
K+K + EN +E NE A + K NN + + +L DD
Sbjct: 194 KEKVVEENLRIRKEIEELRRENEGIAEKMKESNNAVMDENKKLSDD 239
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 118 ENRIT-EHSNEDTANERKSQNNEIHIDMTRLGDDVKGTE-NERKNPSIVVYQFYGAQNQN 291
ENR E + T++E + N I ++ G+ + T NER +V+ F NQN
Sbjct: 6 ENRSDGEMDDVSTSSEIRHGNGFIENFRSQTGNSSRTTATNERIKKKLVIKNFKANANQN 65
Query: 292 DWGMSGGN 315
D M N
Sbjct: 66 DVAMGDTN 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,689,327
Number of Sequences: 27780
Number of extensions: 429858
Number of successful extensions: 1459
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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