Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m06
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    29   0.029
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.27 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.27 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 29.5 bits (63), Expect = 0.029
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -3

Query: 325 VFSNQQSSIPKYSYPASRYPSLTIKSAVLFIRLSLMHSLG-YFSQSVIHLKRSHVSQPIG 149
           +F   ++++P+Y+     YP +T+ +  +  + S  ++   ++ QS + L R    QP G
Sbjct: 409 IFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDVDLSRGMDFQPRG 468

Query: 148 GV 143
            V
Sbjct: 469 SV 470


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 459 RHM*GFHNLRTCRTLSLCCGYNQLWP 382
           RH+ G   + +  T S+ CG  QLWP
Sbjct: 68  RHIKGAIPVVSLSTCSMLCGSTQLWP 93


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -3

Query: 325 VFSNQQSSIPKYSYPASRYPSLTIKSAVLFIRLSLMHSLG-YFSQSVIHLKRSHVSQPIG 149
           +F   ++++P+Y+     YP +T+ +  +  +    + L  ++ QS + L R    QP G
Sbjct: 409 MFQEFKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQSDLDLSRGLDFQPRG 468

Query: 148 GV 143
            V
Sbjct: 469 SV 470


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -3

Query: 313  QQSSIPKYSYPASRYPSLTIKSAVLFIRLSLMHSLGYFSQSVIHLKRSH 167
            Q+  + +Y Y A+ +  +T  S+ + I   +   LGYF   +  +   H
Sbjct: 1209 QRMVVARYVYYATIFTIITATSSFVTIHNVIGQFLGYFIGLITFVMSQH 1257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,625
Number of Sequences: 336
Number of extensions: 4520
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)