Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m06
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0482 + 18218163-18218362,18220388-18220446,18223027-182230... 160 9e-40
10_08_0478 + 18192636-18192784,18192991-18193052,18193381-181934... 157 6e-39
07_03_1689 + 28710936-28711129,28711283-28711341,28711858-287118... 134 9e-32
07_03_0230 + 15526504-15526673,15526809-15526867,15527135-155271... 103 1e-22
01_05_0126 - 18391879-18391937,18392021-18392102,18392508-183926... 51 1e-06
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 31 0.70
03_06_0334 + 33208266-33208481,33208789-33208940,33209141-332092... 31 1.2
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 30 1.6
03_02_0109 + 5671418-5671631,5675610-5675690,5676249-5676340,567... 29 5.0
01_05_0386 - 21683909-21685334,21685513-21685541 28 6.6
02_05_0170 - 26431937-26434282 28 8.7
>10_08_0482 +
18218163-18218362,18220388-18220446,18223027-18223083,
18223245-18223279,18223617-18223720,18223870-18223945,
18224045-18224103,18224183-18224248,18224338-18224421,
18224503-18224567,18224658-18224740,18224832-18224903,
18225166-18225306,18225395-18225456,18225539-18225605,
18225863-18226075
Length = 480
Score = 160 bits (389), Expect = 9e-40
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Frame = +3
Query: 120 ALNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLG 299
A NGL TP MGW +W F C I+E +I+ TAD +V+ G GY+Y+
Sbjct: 55 AFENGLGRTPQMGWNSWNHFYC----------GINEQIIRETADALVNTGLAKLGYQYVN 104
Query: 300 IDDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAG-YPGVL 476
IDDCW E +RD +G VP+R+ FP+G+KA+ADY+H+KGLK G+Y D G+ TC+ PG L
Sbjct: 105 IDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSL 164
Query: 477 GNEKIDINTFVEWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSW 638
+E+ D+ TF W +DYLK D C + + Y + G++I +S C W
Sbjct: 165 DHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEW 219
>10_08_0478 +
18192636-18192784,18192991-18193052,18193381-18193437,
18193771-18193805,18193940-18194043,18194238-18194313,
18194469-18194527,18194879-18194962,18195065-18195129,
18195241-18195323,18195670-18195760,18195847-18196157
Length = 391
Score = 157 bits (382), Expect = 6e-39
Identities = 74/142 (52%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Frame = +3
Query: 123 LNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLGI 302
L NGLA PPMGW +W F C + E +I+ TAD +VS G AGY+Y+ I
Sbjct: 39 LANGLATAPPMGWNSWNHFACDGN---------GEDVIRETADALVSTGLAAAGYKYVNI 89
Query: 303 DDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAG-YPGVLG 479
DDCW E RD KG LV ++K FP+G+KA+ADY+HSKGLK G+Y D G TCA PG LG
Sbjct: 90 DDCWAEPQRDSKGNLVANKKTFPHGIKALADYVHSKGLKLGIYSDAGFKTCAKVQPGSLG 149
Query: 480 NEKIDINTFVEWEIDYLKLDGC 545
+E+ D TF W +DYLK D C
Sbjct: 150 HEEQDAKTFASWGVDYLKYDNC 171
>07_03_1689 +
28710936-28711129,28711283-28711341,28711858-28711892,
28712123-28712226,28712325-28712397,28712495-28712553,
28712656-28712721,28712815-28712898,28712995-28713059,
28713152-28713342,28713522-28713612,28714076-28714134,
28714732-28714872,28715214-28715321
Length = 442
Score = 134 bits (323), Expect = 9e-32
Identities = 81/202 (40%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Frame = +3
Query: 123 LNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLGI 302
LNNGLA+TP MGW +W F C I+E++I+ T
Sbjct: 54 LNNGLALTPQMGWNSWNFFACN----------INETVIRDT------------------- 84
Query: 303 DDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAGYPGVLGN 482
DDCW R K +L+PD K FP+G+K +ADY+H KGLK G+Y D G TC PG L +
Sbjct: 85 DDCWSNVKRGKKDQLLPDPKTFPSGIKDLADYVHGKGLKLGIYSDAGIFTCQVRPGSLHH 144
Query: 483 EKIDINTFVEWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSWPAYQEEK 659
EK D F W +DYLK D CY I+ YP LN+TGR I YS C W Q++
Sbjct: 145 EKDDAAIFASWGVDYLKYDNCYNLGIKPKDRYPPMRDALNSTGRQIFYSLCEWG--QDDP 202
Query: 660 KILPNYASIAEHCNLWRNYDDI 725
+ N WR DDI
Sbjct: 203 ALWAGKVG-----NSWRTTDDI 219
>07_03_0230 +
15526504-15526673,15526809-15526867,15527135-15527139,
15528165-15528268,15528362-15528437,15528646-15528704,
15528803-15528868,15529372-15529455,15529608-15529672,
15529758-15529840,15529949-15530039,15530142-15530194,
15530285-15530428,15530562-15530675
Length = 390
Score = 103 bits (247), Expect = 1e-22
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +3
Query: 339 GRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCA-GYPGVLGNEKIDINTFVEW 515
G + D K+FP+G+KA+ADY+HSKGLK G+Y G+ TC+ PG LG E ID TF W
Sbjct: 79 GYIAADPKKFPSGIKALADYVHSKGLKLGIYSSAGSRTCSKTMPGSLGYEDIDAKTFASW 138
Query: 516 EIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSW 638
+DYLK D C D +P L TGR I YS C W
Sbjct: 139 GVDYLKYDNCNSDGSSETVRFPKMSFALRKTGRPIFYSICEW 180
Score = 34.3 bits (75), Expect = 0.100
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 123 LNNGLAMTPPMGWLTWERFRC 185
L+NGL TP MGW +W F C
Sbjct: 46 LDNGLGRTPQMGWNSWNHFGC 66
>01_05_0126 -
18391879-18391937,18392021-18392102,18392508-18392667,
18392739-18392807,18392850-18392992,18393069-18393203,
18393283-18393341,18394090-18394187,18394347-18394510,
18394586-18394647,18394803-18394977,18396331-18396588,
18396694-18396841,18398458-18398813
Length = 655
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +3
Query: 126 NNGLAMTPPMGWLTWERFRCITDCEKYPN--ECISESLIKRTADLMVSEGYLDAGYEYLG 299
N LA PP GW +++ F I D Y E ++E L+ + V + Y +
Sbjct: 125 NEQLAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPHGYEFAVIDYLWYRKYVHGA 184
Query: 300 IDDCWLEKTRDDKGRLVPDRKRFPN-----GMKAIADYIHSKGLKFGMY 431
D + D+ GR PD +RFP+ G +A+ +H GLKFG++
Sbjct: 185 YTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIH 233
>02_05_0640 -
30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 31.5 bits (68), Expect = 0.70
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +3
Query: 21 NKDKLKIKFTERVRSKIKMIRLI-----LVFLTISHSYALNNGLAMTPPMGWLTWER-FR 182
N+DK ++ F E VRS ++ + I LV + + + LA + P G L WER R
Sbjct: 326 NEDKCRVPFYELVRSNLQFLENIPDDEALVSIIMEIHRRRDMDLANSIPKGGLDWERALR 385
Query: 183 CI 188
C+
Sbjct: 386 CL 387
>03_06_0334 +
33208266-33208481,33208789-33208940,33209141-33209221,
33209371-33209491
Length = 189
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 87 ILVFLTISHSYALNNGLAMTPPMGWLTWE--RFRCITDCE 200
IL+ IS +LNN ++ +GW W+ R+RCI E
Sbjct: 146 ILLMDAISRMNSLNNAISRMNSLGWSLWDYSRWRCILALE 185
>05_06_0223 -
26525618-26526112,26526203-26526370,26526649-26527473,
26527898-26528004,26529701-26529767
Length = 553
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -1
Query: 411 LCCGYNQLWPSSHLEIVSCRVPADLYHRVSSLTNNRRYLNIHILHLDILR*PSNLLSFLL 232
L C ++ + HL++ CR +Y ++ L YLN+ + HL ++ + LS L+
Sbjct: 222 LACFLSECFALKHLDLSYCREL--VYLKIPCLLEQLSYLNVDLCHLQMIESKAPNLSSLI 279
Query: 231 GSRLCIR*DISRS 193
S I + +S
Sbjct: 280 YSGNLIELSLGQS 292
>03_02_0109 +
5671418-5671631,5675610-5675690,5676249-5676340,
5676433-5676513,5676594-5676691,5676872-5676953,
5677050-5677088
Length = 228
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 573 GYPDFGKLLNATGRSILYSCSWP 641
G+P FG LL A G +L+S WP
Sbjct: 171 GWPFFGMLLEAYGFVVLFSGFWP 193
>01_05_0386 - 21683909-21685334,21685513-21685541
Length = 484
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 471 VLGNEKIDINTFVEWEIDYLKLDGCYIDPIQ-MDK-GYPDFGKLLNATGRSILYSCSWPA 644
V G K+D + ++ +YL+ I +Q +D+ YP+ +N + + + S P
Sbjct: 397 VPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNAAMSINTAAATTMATSSSPT 456
Query: 645 YQEEKKILPNYA 680
Y +P +A
Sbjct: 457 YNNSNAAMPAFA 468
>02_05_0170 - 26431937-26434282
Length = 781
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 477 GNEKI--DINTFVE-WEIDYLKLDGCYIDPIQMDK 572
G EK+ D+N F + +EID ++++ Y+DP Q K
Sbjct: 551 GWEKLLDDVNQFCDLYEIDMMEMESTYVDPRQPRK 585
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,127,555
Number of Sequences: 37544
Number of extensions: 451708
Number of successful extensions: 1049
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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