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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m05
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.61 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = +1

Query: 340 LPKCMYHIKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLE 483
           LP+  +++   +D+ E+D I +  N +   +K+  L   Q+ L ++++
Sbjct: 314 LPEIQHNLDVLVDMCEQDIIRIDRNTRFNQDKIVALRQEQETLKSQVQ 361


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -1

Query: 371 GFLMWYIHFGNSILSSWSTILFITYIIIYQP---YPRC 267
           G+ +++ HF   I+   + I+ +   +IY+P   +PRC
Sbjct: 665 GYWLFHCHFLFHIVIGMNLIIHVGTQLIYRPFSHFPRC 702


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 544 NIQSSNASKVESVITPEEVVLVLSPDSLP 630
           N+ + + S+V ++ TP  + L L+ +SLP
Sbjct: 451 NLDNVSLSQVPALSTPNLLSLSLAFNSLP 479


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,039
Number of Sequences: 336
Number of extensions: 3711
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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