Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m05
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ...    32   0.35 
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage...    32   0.35 
Z68296-3|CAB54197.2|  223|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical...    28   5.8  
AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical...    28   5.8  
Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z46267-5|CAA86423.1|  216|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine re...    28   7.6  
AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine re...    28   7.6  

>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
           protein Y39A1B.3 protein.
          Length = 1499

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
 Frame = +1

Query: 373 IDLTEEDEICLKINE---KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKLDNM 537
           + LT+ D+  L  NE   +  NN++ +L  +  +L+NK+ I  E  R  TI+ +C L+  
Sbjct: 653 VQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVLNGE 712

Query: 538 SANIQ 552
           +A I+
Sbjct: 713 TAEIK 717


>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
           compensation protein protein.
          Length = 1455

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
 Frame = +1

Query: 373 IDLTEEDEICLKINE---KGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKLDNM 537
           + LT+ D+  L  NE   +  NN++ +L  +  +L+NK+ I  E  R  TI+ +C L+  
Sbjct: 609 VQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVLNGE 668

Query: 538 SANIQ 552
           +A I+
Sbjct: 669 TAEIK 673


>Z68296-3|CAB54197.2|  223|Caenorhabditis elegans Hypothetical
           protein C46C2.5 protein.
          Length = 223

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 433 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKV 573
           ++ E+ET Q+   N +++LY++    S    L ++S +I+SSN S +
Sbjct: 59  ELREIETLQNSKFNNVDVLYDKDLMKSLFGDLKSISLSIKSSNCSSM 105


>Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical
           protein Y69H2.1 protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
 Frame = -3

Query: 501 YPLV*YF*LVQEFILPCLQFSHLIIRTLFIDFQTNFIFFCKIDRIFN-----VVHTFRQL 337
           YP V +  L++ F+L C Q + LI   + ID     +F  K  ++FN     V+ TF +L
Sbjct: 116 YPSVLHCSLLRHFVLACFQSAGLITVPIAID-HICLVFLKKKLKVFNLVVIQVIITFVEL 174

Query: 336 YFII 325
           +F +
Sbjct: 175 FFTL 178


>Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical
           protein R04B5.4b protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 477 LVQEFILPCLQ-FSHLIIRTLFIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVND 313
           LV ++I  C   F  L +    I FQ  F+FFC ++R F  V + R    ++   D
Sbjct: 247 LVADWIEWCFDDFGLLPVDQKTILFQNFFVFFCMLERAFMTVKSGRDGIVVMASKD 302


>Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical
           protein R04B5.4a protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 477 LVQEFILPCLQ-FSHLIIRTLFIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVND 313
           LV ++I  C   F  L +    I FQ  F+FFC ++R F  V + R    ++   D
Sbjct: 247 LVADWIEWCFDDFGLLPVDQKTILFQNFFVFFCMLERAFMTVKSGRDGIVVMASKD 302


>Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical
           protein F36G9.7 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -3

Query: 432 IIRTLFIDFQTNFIFFCKI----DRIFNVVHTFRQLY 334
           I+ +++  F   F++FCKI      IFN++  F QL+
Sbjct: 181 ILYSIYFGFLALFVYFCKIHHLFSSIFNLIVNFCQLF 217


>AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26b protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/52 (23%), Positives = 28/52 (53%)
 Frame = +1

Query: 361 IKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 516
           ++  ID+  ++E+  +  +K   N        ++ELL+KL  ++E  K++ +
Sbjct: 231 VRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 282


>AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26a protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/52 (23%), Positives = 28/52 (53%)
 Frame = +1

Query: 361 IKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISS 516
           ++  ID+  ++E+  +  +K   N        ++ELL+KL  ++E  K++ +
Sbjct: 293 VRKCIDMAVDEEVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEKSLGA 344


>Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical
           protein C47A10.7 protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 120 ILKLLLLASIICMNESRFLLTYK*LKFYRCLNHYLI 13
           ++  L+  SIIC+ E+RF + +    F+R   H +I
Sbjct: 99  VIAYLMPVSIICLFENRFYILFASKTFWRYARHPII 134


>Z46267-5|CAA86423.1|  216|Caenorhabditis elegans Hypothetical
           protein F49E2.4 protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 417 FIDFQTNFIFFCKIDRIFNVVHTFRQLYFIIVVN 316
           F+D     + FC I  +F++ H   Q++F   VN
Sbjct: 81  FLDTAVGSLGFCPISSVFDMAHRIGQIHFYRGVN 114


>Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical
           protein ZK632.8 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 410 IFKQISSSSVRSIGFLMWYIHFGNSILSSWSTILFITYIII 288
           I   +   S R++ F++W I    S+  SWST    T ++I
Sbjct: 49  IGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVI 89


>AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine
           receptor, class h protein128 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -1

Query: 425 GPFSLIFKQISSSSVRSIGFLMWYIHFGNSILSSWSTILFITYIIIYQPYPRCYSVFFFV 246
           G + ++FK  +   ++S+   M+ +HF +S+L      L + Y+I   P P    + F  
Sbjct: 33  GGYVILFK--TPQKMKSVKMSMFLLHFWSSLLDITICFLIVPYVIF--PIPGGIPLGFLS 88

Query: 245 LMG 237
            +G
Sbjct: 89  FLG 91


>AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine
           receptor, class h protein34 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 398 ISSSSVRSIGFLMWYIHFG-NSILSSWSTILFITYIIIYQP 279
           + + S +S GFL W I+F    +   W    F+  I+ +QP
Sbjct: 37  VLTKSPKSFGFLKWIIYFHCCCVTCEWLNNAFLIDIMTFQP 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,812
Number of Sequences: 27780
Number of extensions: 322010
Number of successful extensions: 911
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)