Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m05
         (713 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g14740.1 68414.m01762 expressed protein                             32   0.33 
At5g40450.1 68418.m04905 expressed protein                             31   0.76 
At1g58520.1 68414.m06653 early-responsive to dehydration protein...    31   1.0  
At5g45310.1 68418.m05562 expressed protein                             30   1.8  
At2g29380.1 68415.m03569 protein phosphatase 2C, putative / PP2C...    29   3.1  
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein...    29   4.0  
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein...    29   4.0  
At5g06670.1 68418.m00753 kinesin motor protein-related                 28   5.3  
At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C...    28   5.3  

>At1g14740.1 68414.m01762 expressed protein
          Length = 733

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 17/71 (23%), Positives = 34/71 (47%)
 Frame = +1

Query: 409 INEKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVIT 588
           + E  PN+   +    ++E   + +    +I+T++    L ++S ++ +SNA K   V+T
Sbjct: 114 LREMNPNSSKRKAHEEEEEAEEEEDKKSNKIETLNLSLALPDVSLSLTASNAVKRPRVVT 173

Query: 589 PEEVVLVLSPD 621
            E      S D
Sbjct: 174 SERTTTSFSND 184


>At5g40450.1 68418.m04905 expressed protein
          Length = 2910

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
 Frame = +1

Query: 301  VMKRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKGPNNKM-----TELETRQDE 465
            V ++I +  D IEL +     ++  DLT   E   + NE+    K+     T  E + DE
Sbjct: 956  VDEKIEEKTDSIELGEIAQEERSVTDLTPLQEESSQPNEQEKETKLEKHEPTNEEVKSDE 1015

Query: 466  LLNKLEILYERI---KTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSL 627
            ++  L     +    +T+     ++N+  N +   A K++  +  E V  V SP SL
Sbjct: 1016 VIEVLSASPSKELEGETVVEAENIENIKENEEEQAAEKIQKSL--ETVQTVESPSSL 1070


>At1g58520.1 68414.m06653 early-responsive to dehydration
           protein-related / ERD protein-related low similarity to
           ERD4 protein (early-responsive to dehydration stress)
           [Arabidopsis thaliana] GI:15375406; contains Pfam
           profile PF02714: Domain of unknown function DUF221
          Length = 657

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +1

Query: 409 INEKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNM--SANIQSSNASKVESV 582
           I  K P   + +++ R DE+  K+E L++++  + SQ  L +   S+  + SN  K + +
Sbjct: 565 IFNKNPAQVLIDMD-RADEISGKMEELHKKLHNVYSQIPLHSQKSSSKAECSNPFKKQEL 623

Query: 583 ITPEEV 600
             PE++
Sbjct: 624 PDPEKL 629


>At5g45310.1 68418.m05562 expressed protein
          Length = 352

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +1

Query: 436 MTELETRQDELLNKLEILYERIKTISSQ-CKLDNMSANIQSSNASKVESVITPEEVVLVL 612
           + ELE   DE ++K+E L   ++ +  +  +L  ++     S   KV+    P E+  + 
Sbjct: 128 LDELEDEHDEAISKIEKLEAELQELKEENLQLMEVNGKDYRSKKGKVKPSEEPSEIRSIH 187

Query: 613 SPDSLPW 633
            P ++P+
Sbjct: 188 KPKNIPY 194


>At2g29380.1 68415.m03569 protein phosphatase 2C, putative / PP2C,
           putative contains  PF00481: Protein phosphatase 2C
           domain; similar to protein phpsphatase 2C (PP2C)
           (GI:7768151) [Fagus sylvatica].
          Length = 362

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 508 ISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDS 624
           +++ CK D  +    S  ++ V SVITP+++V+    DS
Sbjct: 173 VTANCKCDLQTPACDSVGSTAVVSVITPDKIVVANCGDS 211


>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
           (ZWICHEL) identical to kinesin-like protein GI:2224925
           from [Arabidopsis thaliana]
          Length = 1260

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +1

Query: 373 IDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQ 552
           I+  +++E+  +I++K    +   L+ R  EL NKLE+L + + +  S  +  N    + 
Sbjct: 769 IEKKKKEEV--EIHQKRYEQEKKVLKLRVSELENKLEVLAQDLDSAESTIESKNSDMLLL 826

Query: 553 SSNASKVESV 582
            +N  ++E +
Sbjct: 827 QNNLKELEEL 836


>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
           (ZWICHEL) identical to kinesin-like protein GI:2224925
           from [Arabidopsis thaliana]
          Length = 1259

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +1

Query: 373 IDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQ 552
           I+  +++E+  +I++K    +   L+ R  EL NKLE+L + + +  S  +  N    + 
Sbjct: 768 IEKKKKEEV--EIHQKRYEQEKKVLKLRVSELENKLEVLAQDLDSAESTIESKNSDMLLL 825

Query: 553 SSNASKVESV 582
            +N  ++E +
Sbjct: 826 QNNLKELEEL 835


>At5g06670.1 68418.m00753 kinesin motor protein-related 
          Length = 992

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 412 NEKGPNNKMTELETRQD--ELLNKLEILYERIKTISSQCKLDNMSANIQSSNASK 570
           N +   +   E+ET +   ++++++EIL E+ KT+S +    + S  + S  A+K
Sbjct: 617 NREAHEDSFHEIETPETRIKMIDQMEILREQQKTLSEEMAQQSRSFKLLSEEAAK 671


>At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C,
           putative similar to GB:CAB90633 from [Fagus sylvatica]
          Length = 442

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +1

Query: 409 INEKGPNNKMTELETRQDELLNKL--EILYERIKTISSQCKLDNMSANIQSSNASKVESV 582
           + E+  ++K  E +   +    ++  E++      +S+ C+ +  + +  +  ++ V SV
Sbjct: 181 VQEEALSDKKEEWKKMMERSFTRMDKEVVRWGETVMSANCRCELQTPDCDAVGSTAVVSV 240

Query: 583 ITPEEVVLVLSPDS 624
           ITPE++++    DS
Sbjct: 241 ITPEKIIVANCGDS 254


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,048,736
Number of Sequences: 28952
Number of extensions: 281663
Number of successful extensions: 710
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)