Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m04
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.27
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.81
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 7.5
U88184-14|AAK31520.1| 821|Caenorhabditis elegans Hypothetical p... 27 7.5
AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF043702-10|AAK21498.1| 130|Caenorhabditis elegans Hypothetical... 27 10.0
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 27 10.0
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 436 PPGACDPPKMQCPNTPAPAPDKDCPLRP 519
PP C PP M CP P P P CP P
Sbjct: 52 PPQFCPPPPM-CPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 436 PPGACDPPKMQCPNTPAPAPDKDCPLRP 519
PP C PP + CP P P + CP P
Sbjct: 34 PPPMCAPPPLPCPPPPI-CPPQFCPPPP 60
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +1
Query: 436 PPGACDPPK---MQCPNTPAPAPDKDCP 510
PP C PP M CP P P P CP
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 406 PEKTLTTIVRP-PGACDPPKMQCPNTPAPAP 495
P + + RP P C P M+CPN PAP
Sbjct: 180 PAPCVCSAPRPVPCRCGAPPMECPNCDMPAP 210
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 457 PKMQCPNTPAPAPDKDCPLRPCD 525
PK +C P P + C L PCD
Sbjct: 1859 PKEKCELFPKPNESQTCELNPCD 1881
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 457 PKMQCPNTPAPAPDKDCPLRPCD 525
PK +C P P + C L PCD
Sbjct: 1859 PKEKCELFPKPNESQTCELNPCD 1881
>U88184-14|AAK31520.1| 821|Caenorhabditis elegans Hypothetical
protein F36H5.1 protein.
Length = 821
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 52 LPRNSVSCNIVHSNRQQKRQTSKMIVKSP 138
L + V+CN+V +N R+TSK+ + P
Sbjct: 482 LIKTEVTCNLVSTNGNNFRRTSKLCFEKP 510
>AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical
protein Y65B4BL.1 protein.
Length = 422
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -2
Query: 461 FGGSQAPGGLTIVVSVFSGLNIPYEYATPNVPDNNKATSFVC 336
F + + GGL + + + IP Y+ P +PD + +C
Sbjct: 137 FSSNNSSGGLFSSILILISIIIPSVYSEPKLPDCEQIPKVLC 178
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 211 NTMYNGIKPTRLWHLTPRKYFDRMIQDK 294
NT+ G + W +P +YFD M++ K
Sbjct: 1594 NTLTRGDVSSLTWFESPNQYFDSMVKSK 1621
>AF043702-10|AAK21498.1| 130|Caenorhabditis elegans Hypothetical
protein W03D8.3 protein.
Length = 130
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 427 IVRPPGACDPPKMQCPNTPAPAPDKDCPLRPCDK*SVIRELFKIKGINKISK 582
++ PP P P P PAP P SV ++ F+++ K SK
Sbjct: 13 LLAPPPPSQQPAAVAPRAPRPAPGHPAPTNELPPVSVAKK-FEVQPAQKGSK 63
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 428 IVVSVFSGLNIPYEYATPNVPDNNKATSFVCSDFDLCVNPFRTSILSWIILSKY 267
+ +SVF L +P +T V +N F DF+ +N W I+SKY
Sbjct: 3 LFLSVFLLLILPL-ISTSAVENNQNIVDFSVKDFNKNINSIDILNKKWDIVSKY 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,048,312
Number of Sequences: 27780
Number of extensions: 321455
Number of successful extensions: 1029
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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