Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m04
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    26   0.32 
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   3.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   3.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.2  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 458 GGSQAPGGLTIVVSVFSGLNIPYEYATPNV--PDN 360
           G    P G T+V+  F     P+ Y  P+V  PDN
Sbjct: 430 GDYTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDN 464


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 292 KIEVRNGFTQRSKSEQTKLVALLLSGTL 375
           K+  R G + R +++ TK+VAL+++  L
Sbjct: 94  KVRKRAGASGRREAKITKMVALMITAFL 121


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 445 ACDPPKMQCPNTPAPAP 495
           AC PP + CP  P P P
Sbjct: 212 AC-PPTLACPLNPNPQP 227


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 404 LNIPYEYATPNVPDNNKAT 348
           +N+P+E   P++PD    T
Sbjct: 63  MNVPFEETLPSLPDRKFQT 81


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 202  PPPNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVR 306
            PPPNT  NGI      H  P         D++EVR
Sbjct: 1134 PPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVR 1168


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 202  PPPNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVR 306
            PPPNT  NGI      H  P         D++EVR
Sbjct: 1130 PPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVR 1164


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 404 LNIPYEYATPNVPDNNKAT 348
           +N+P+E   P++PD    T
Sbjct: 65  MNVPFEETLPSLPDRKFQT 83


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 443 PGGLTIVV-SVFSGLNIPYEYATPNVPDNNKATSFVCSDFDLC 318
           PG  TI   S  S + IP+E    N+ +N          FD C
Sbjct: 537 PGKNTIEQKSTKSSVTIPFERTFRNLDENRPIGGDSLERFDFC 579


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,346
Number of Sequences: 438
Number of extensions: 3976
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)