Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m03
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036340-1|AAH36340.1|  392|Homo sapiens C1orf85 protein protein.      32   1.6  
BC018757-1|AAH18757.1|  406|Homo sapiens chromosome 1 open readi...    32   1.6  
BC011575-1|AAH11575.1|  415|Homo sapiens C1orf85 protein protein.      32   1.6  
AL589685-6|CAI14164.1|  406|Homo sapiens chromosome 1 open readi...    32   1.6  
AK075349-1|BAC11561.1|  406|Homo sapiens protein ( Homo sapiens ...    32   1.6  
AY358450-1|AAQ88815.1|  406|Homo sapiens RGSV2553 protein.             32   2.1  

>BC036340-1|AAH36340.1|  392|Homo sapiens C1orf85 protein protein.
          Length = 392

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ V W   +       +  L  ++
Sbjct: 42  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 101

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 102 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 150


>BC018757-1|AAH18757.1|  406|Homo sapiens chromosome 1 open reading
           frame 85 protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ V W   +       +  L  ++
Sbjct: 56  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164


>BC011575-1|AAH11575.1|  415|Homo sapiens C1orf85 protein protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ V W   +       +  L  ++
Sbjct: 65  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 124

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 125 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 173


>AL589685-6|CAI14164.1|  406|Homo sapiens chromosome 1 open reading
           frame 85 protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ V W   +       +  L  ++
Sbjct: 56  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164


>AK075349-1|BAC11561.1|  406|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0030 fis, clone NT2RP1000567, highly similar to
           Kidney predominant protein NCU-G1. ).
          Length = 406

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ V W   +       +  L  ++
Sbjct: 56  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDS 115

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164


>AY358450-1|AAQ88815.1|  406|Homo sapiens RGSV2553 protein.
          Length = 406

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +3

Query: 348 LVYIKADSSKDSIHQLWDFTGGIPTVVFALTELNSTMQVKWDRQVP------VKFLLSET 509
           L++I+A  +  ++H +W   G +  V+ A    +ST+ + W   +       +  L  ++
Sbjct: 56  LLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLSINWSLLLSPEPDGGLMVLPKDS 115

Query: 510 PKYCFAIAIDKLYEYN--DVEDKGHISPQCEQRPMSLKYMSW-TLVDSV 647
            ++  A+   +L E++  +V D           P SL   SW  + DS+
Sbjct: 116 IQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYSLADFSWNNITDSL 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,835,108
Number of Sequences: 237096
Number of extensions: 1998687
Number of successful extensions: 4468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4468
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)