Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m02
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.20 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 344 KTIMGSYSGCNVLA*IWKKKNLACTRPVLDWNSNDYSIILC 466
           KT M ++S    +  +WK  N+    P  ++N N     LC
Sbjct: 396 KTTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIHSKLC 436


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 627  NTVGQTAGFFLGYVMFL 677
            N +GQ  G+F+G + F+
Sbjct: 1237 NVIGQFLGYFIGLITFV 1253


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 670 ITYPKKNPAVWPTVLH 623
           IT P  NP +WP  ++
Sbjct: 327 ITAPLSNPPLWPYTMY 342


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 712 KYLVQKYGDSRARNITYPKKNPAVWPTVLHVE 617
           KYLV+    S A         PA+WP  +H++
Sbjct: 55  KYLVEDEETSLA-TCNMLCSEPAIWPKPVHIK 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,475
Number of Sequences: 336
Number of extensions: 4080
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)