BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10m02 (719 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related /... 33 0.25 At1g78895.1 68414.m09197 expressed protein 30 1.3 At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 28 5.4 At2g19650.1 68415.m02296 DC1 domain-containing protein contains ... 28 7.2 At2g07739.1 68415.m00990 expressed protein 28 7.2 At1g43720.1 68414.m05023 hypothetical protein 27 9.5 At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 27 9.5 >At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related / PAP2-related contains Pfam profile PF01569: PAP2 superfamily Length = 279 Score = 32.7 bits (71), Expect = 0.25 Identities = 16/67 (23%), Positives = 37/67 (55%) Frame = -2 Query: 598 LFNIVKAQPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVTQYDTIIITIPIKYWT 419 L+ ++ + ++A+S V + N + T ++ + G PS +QS++ + ++ + + W Sbjct: 126 LWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQSIS-FISVFAVLSVMEWL 184 Query: 418 GTSQVFL 398 GT+ V L Sbjct: 185 GTNGVSL 191 >At1g78895.1 68414.m09197 expressed protein Length = 164 Score = 30.3 bits (65), Expect = 1.3 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 306 VACTLCLYFVKALGQL-QLIPVVYPVMCIGTTKQLC 202 V +CLYF+ ALG+L + V Y +C+ LC Sbjct: 102 VKVVICLYFLSALGRLISGVTVAYAGLCLFCLSMLC 137 >At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:7939621 from [Lycopersicon esculentum]; contains Pfam profile PF01301 : Glycosyl hydrolases family 35 Length = 988 Score = 28.3 bits (60), Expect = 5.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -2 Query: 577 QPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVT 464 QP T + C A NN +DT +I +G +PS+S++ Sbjct: 312 QPGTKV-CAAFLSNNNTRDTNTIKFKGQDYVLPSRSIS 348 >At2g19650.1 68415.m02296 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 682 Score = 27.9 bits (59), Expect = 7.2 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = -3 Query: 75 IHHKCSKVPMLKKHV 31 IH KC+K+P+ K+HV Sbjct: 448 IHEKCAKLPLKKRHV 462 >At2g07739.1 68415.m00990 expressed protein Length = 199 Score = 27.9 bits (59), Expect = 7.2 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +3 Query: 288 GITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVS-YC 464 G+ Y FS+ PF + LL A ++D E G K ++ G +M+ +S Y Sbjct: 26 GLYYGFLTTFSI--GPFYLFLLRARVMDE---GEEGTEKKVSATTGFIAGQLMMFISIYY 80 Query: 465 VTDWLGIDGEPPSMTILTVSFLLLNF 542 L + G P ++T+L + +LL +F Sbjct: 81 APLHLAL-GRPHTITVLALPYLLFHF 105 >At1g43720.1 68414.m05023 hypothetical protein Length = 314 Score = 27.5 bits (58), Expect = 9.5 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +3 Query: 597 RCNVGHASTCNTVG 638 +C VGHA+ C+TVG Sbjct: 259 KCTVGHATKCSTVG 272 >At1g19700.1 68414.m02457 homeobox-leucine zipper family protein similar to BEL1-like homeodomain 1 (GI:13877517) [Arabidopsis thaliana]; similar to homeodomain protein GI:7239157 from (Malus domestica); contains weak hit to Pfam profile PF00046: Homeobox domain Length = 538 Score = 27.5 bits (58), Expect = 9.5 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 270 MLLQNKGITYTQQAEFSLVNWPFSVKL-LWAPIVDAMFWPEFGRRKTWLV 416 ML + G++ Q A NW + ++ LW P+++ M+ EFG L+ Sbjct: 386 MLAKQTGLSKNQVA-----NWFINARVRLWKPMIEEMYKEEFGDESELLI 430 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,985,816 Number of Sequences: 28952 Number of extensions: 333394 Number of successful extensions: 871 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 843 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 871 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1565336320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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