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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m02
         (719 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related /...    33   0.25 
At1g78895.1 68414.m09197 expressed protein                             30   1.3  
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si...    28   5.4  
At2g19650.1 68415.m02296 DC1 domain-containing protein contains ...    28   7.2  
At2g07739.1 68415.m00990 expressed protein                             28   7.2  
At1g43720.1 68414.m05023 hypothetical protein                          27   9.5  
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ...    27   9.5  

>At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related /
           PAP2-related contains Pfam profile PF01569: PAP2
           superfamily
          Length = 279

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 16/67 (23%), Positives = 37/67 (55%)
 Frame = -2

Query: 598 LFNIVKAQPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVTQYDTIIITIPIKYWT 419
           L+ ++ +  ++A+S V  +  N  + T ++  + G PS  +QS++ + ++   + +  W 
Sbjct: 126 LWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQSIS-FISVFAVLSVMEWL 184

Query: 418 GTSQVFL 398
           GT+ V L
Sbjct: 185 GTNGVSL 191


>At1g78895.1 68414.m09197 expressed protein
          Length = 164

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 306 VACTLCLYFVKALGQL-QLIPVVYPVMCIGTTKQLC 202
           V   +CLYF+ ALG+L   + V Y  +C+     LC
Sbjct: 102 VKVVICLYFLSALGRLISGVTVAYAGLCLFCLSMLC 137


>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
           similar to beta-galactosidase GI:7939621 from
           [Lycopersicon esculentum]; contains Pfam profile PF01301
           : Glycosyl hydrolases family 35
          Length = 988

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 577 QPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVT 464
           QP T + C A    NN +DT +I  +G    +PS+S++
Sbjct: 312 QPGTKV-CAAFLSNNNTRDTNTIKFKGQDYVLPSRSIS 348


>At2g19650.1 68415.m02296 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 682

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 75  IHHKCSKVPMLKKHV 31
           IH KC+K+P+ K+HV
Sbjct: 448 IHEKCAKLPLKKRHV 462


>At2g07739.1 68415.m00990 expressed protein
          Length = 199

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = +3

Query: 288 GITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVS-YC 464
           G+ Y     FS+   PF + LL A ++D     E G  K       ++ G +M+ +S Y 
Sbjct: 26  GLYYGFLTTFSI--GPFYLFLLRARVMDE---GEEGTEKKVSATTGFIAGQLMMFISIYY 80

Query: 465 VTDWLGIDGEPPSMTILTVSFLLLNF 542
               L + G P ++T+L + +LL +F
Sbjct: 81  APLHLAL-GRPHTITVLALPYLLFHF 105


>At1g43720.1 68414.m05023 hypothetical protein 
          Length = 314

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 597 RCNVGHASTCNTVG 638
           +C VGHA+ C+TVG
Sbjct: 259 KCTVGHATKCSTVG 272


>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
           similar to BEL1-like homeodomain 1 (GI:13877517)
           [Arabidopsis thaliana]; similar to homeodomain protein
           GI:7239157 from (Malus domestica); contains weak hit to
           Pfam profile PF00046: Homeobox domain
          Length = 538

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 270 MLLQNKGITYTQQAEFSLVNWPFSVKL-LWAPIVDAMFWPEFGRRKTWLV 416
           ML +  G++  Q A     NW  + ++ LW P+++ M+  EFG     L+
Sbjct: 386 MLAKQTGLSKNQVA-----NWFINARVRLWKPMIEEMYKEEFGDESELLI 430


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,985,816
Number of Sequences: 28952
Number of extensions: 333394
Number of successful extensions: 871
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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