Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10l22
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 0.67
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.67
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 29 2.7
SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07) 29 4.7
SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_20599| Best HMM Match : UPF0172 (HMM E-Value=7.2) 28 6.2
SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44) 28 6.2
SB_9475| Best HMM Match : PAN (HMM E-Value=0.0022) 28 6.2
SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0) 28 8.3
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 338 ANNELKDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETSNMFSDV 499
A L+++K+ + I E+N A DE+ RLR + D + M +D+
Sbjct: 654 ATKRLREIKENTDRIANEVNSTAVKTHQANDEIARLRKLLNDLLQKADQMKNDI 707
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +2
Query: 302 SYLIPDVSQKIHANNELKDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETS 481
SY P S+ + EL+ K ++ + E + + DEL RLR V ++ +
Sbjct: 3195 SYSPPLASKLFNLEYELETANKEKESLEEHVQDLEKSRKNDLDELNRLRKRVKEAEKMHN 3254
Query: 482 NMFSDVSACQSYCMHITR 535
++ S+ S C C R
Sbjct: 3255 DLKSEASKCSEKCEEFRR 3272
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 350 LKDVKKVVN----TITTEINRAEAACLSATDELCRLRCSVLDSTTETSNMFSDVS 502
L+++++ N T+ T R A C T L RL VL+ T +SN+F +V+
Sbjct: 258 LQEIQQATNRMEITLETRQLRTCAVCFDLTVGLLRLLTQVLNRITASSNLFENVT 312
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/117 (19%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +2
Query: 155 PPFQQTSQTSELRDTQKLYKMMMQCLGAVYSAINVNYLALATVFVIVLLSYL--IPDVSQ 328
PPF + + ++L+ + K + + + + A+ TV+ +L + I +V +
Sbjct: 1547 PPFNK--EKNKLKRIIDIIKRAKETKKKMEEILENTFKAMRTVYDDAILQHTKSILEVRR 1604
Query: 329 KIHANNEL----KDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETSNM 487
K+ + +L KD+ V+ + T + A + D ++ ++D TET +
Sbjct: 1605 KLQLSYDLWKKTKDINTVIQALNTVVKGASNYAENIQDVTSKINSPIVDLLTETGEL 1661
>SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 195 TPRNCTK**CSALEPFILLLTSTI*LWQLFS 287
TPRNC L P + +L + LWQLFS
Sbjct: 257 TPRNCGSCPIKELLPLLKVLPFNVLLWQLFS 287
>SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)
Length = 336
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 395 NRAEAACLSATDELCRLRCSVLDSTTETSNMFSDVSACQS 514
N EA T+ LCR++C + D T ++ N + CQ+
Sbjct: 192 NHVEANFTGVTEVLCRIKCFISD-TCQSYNYDNSSQTCQT 230
>SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 134 HYSHSRHPPFQQTSQTSELRDTQKLYKMMMQCLGAVYSAINVNYLALATVFVIVLLSY 307
++S R+ Q + D +K K + +GA YS ++ L ++F + L+SY
Sbjct: 73 NFSFIRNAHLQVGKHCAGYDDNRKARKKTVAVIGAAYSGASMAVTNLCSLFYVPLVSY 130
>SB_20599| Best HMM Match : UPF0172 (HMM E-Value=7.2)
Length = 480
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/80 (23%), Positives = 36/80 (45%)
Frame = +2
Query: 434 LCRLRCSVLDSTTETSNMFSDVSACQSYCMHITRSEPMRSEKKLGFLRKIFFPNKNTSHK 613
+CR++ S + + M S V C++ C +T + + + +PN H
Sbjct: 220 ICRIQLSQRPNAALAAKMTSRV--CRTPCGMVTGVNVVMTTRACTARTGKVWPNPLNRHV 277
Query: 614 EITIMSYVYTDSFNGQASDA 673
E + VYT +F+ + +DA
Sbjct: 278 ECRRKNMVYTFTFDSKTTDA 297
>SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44)
Length = 850
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 362 KKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETSNMFSDVSACQSYCMHITRSE 541
K + N + + ++ AA T + RL + D + + + +C H+T ++
Sbjct: 529 KMIANQLWSAMHEVAAAAKRVTPKKDRLGTTPADG----NRLLETDTPVAVHCRHVTAAK 584
Query: 542 PMRSEKKLGFLRKIFF 589
M E+ FLR I++
Sbjct: 585 RMSDEEPDAFLRPIYY 600
>SB_9475| Best HMM Match : PAN (HMM E-Value=0.0022)
Length = 556
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 395 NRAEAACLSATDELCRLRCSVLDSTTETSNMFSDVSACQS 514
N EA T+ LCR++C + D T ++ N + CQ+
Sbjct: 494 NHVEANFTGVTEVLCRIKCFISD-TCQSYNYDNSSMTCQT 532
>SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0)
Length = 926
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 323 SQKIHANNELKDVKKVVNTIT-TEINRAEAACLSATDELCRLRCSVLDSTTETSN 484
S ++ N L ++++ + +E+ AAC S+ +++C + + S + TSN
Sbjct: 552 SSSVNFNEPLSMLQRITEELEYSEVLDKAAACTSSLEQMCYVAAFTVSSYSTTSN 606
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,063,215
Number of Sequences: 59808
Number of extensions: 444725
Number of successful extensions: 1122
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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