Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10l22
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067214-2|AAC17003.1| 344|Caenorhabditis elegans Hypothetical ... 33 0.15
Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine r... 28 5.5
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical ... 27 9.6
AC006795-7|AAF59497.2| 199|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF067214-2|AAC17003.1| 344|Caenorhabditis elegans Hypothetical
protein F56C3.4 protein.
Length = 344
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/122 (22%), Positives = 49/122 (40%)
Frame = +2
Query: 293 VLLSYLIPDVSQKIHANNELKDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTT 472
+L Y+ + AN + D K N + A L L + CS+ TT
Sbjct: 90 LLEQYIAQTAEPLMQANKKAVDDDKSANNAW----KCVAGVLGVFIVLLVVYCSLAVKTT 145
Query: 473 ETSNMFSDVSACQSYCMHITRSEPMRSEKKLGFLRKIFFPNKNTSHKEITIMSYVYTDSF 652
+ D S C + EP+ +K+G + I P+K + KE + ++ +S+
Sbjct: 146 AVAPFIHDASGSSEACGAV---EPINVLEKIGMVVDISLPSKESVKKEPDSTATLFDESY 202
Query: 653 NG 658
+G
Sbjct: 203 DG 204
>Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical
protein C54D10.3 protein.
Length = 172
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +2
Query: 290 IVLLSYLIPDVSQKIHANNELKDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDST 469
I+L+S L+ S + AN++ +K VNT+ I ACL T+ C + ST
Sbjct: 4 IILVSTLVASASAQTCANDQGPCLKMTVNTMDIYICPEGMACL--TNSTCCEYADIQVST 61
Query: 470 TETSNMFSDVSAC 508
T T+ S S C
Sbjct: 62 TTTTTAAS-TSTC 73
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 242 YSAINVNYLALATVFV-IVLLSYLIPDVSQKIHANNELKDVKKVVNTITTEINRAEAACL 418
YSA+ + +AL +VFV + L++ I V ++H +E++ K + E++
Sbjct: 15 YSAVTFSLIALVSVFVTLPLVNNYIHSVHLRVH--DEMQFCKLSARDVMLEMHNFRQTPN 72
Query: 419 SATDELCRLRCSVLDSTTETSNMFSDVSACQSYCM 523
L + S+ ET+ + D +ACQ C+
Sbjct: 73 K------NLPFFLRRSSNETTRLKRDAAACQGCCL 101
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -3
Query: 394 YFCRYSINNFLDILQLIICMYFLRYVRYEIAQKYYYENSCQS*IVDVNSRINGSKALHH- 218
YFC+ + L ++ + Y L + YE + K CQ +V +++ + L
Sbjct: 11 YFCKIFLLITLVLITCAMVAYGLSKINYEYSSKLMANFKCQKRVVAYSAKFLSNHQLKKL 70
Query: 217 -HFVQFLGVSEF*RLTGLLEW 158
HF+ F +S F G ++W
Sbjct: 71 THFI-FTSISIF--PNGTIKW 88
>AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine
receptor, class t protein23 protein.
Length = 356
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -2
Query: 626 LLLFPCAKYFCSERISYEESQAFFRCASVLIALCACN 516
+LLF +K+F SE IS ++Q FF+ SVLI C+ N
Sbjct: 228 ILLFAKSKHFRSESISRTQTQIFFQ--SVLI--CSFN 260
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 359 VKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETSNMFSDVSACQSYC 520
++ V +I T A+C+ A C +C +TTET + ACQ C
Sbjct: 280 IQSVTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTTETC-----IPACQPAC 328
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 344 NELKDVKKVVNTITTEINRAEAACLSATDELCRLRCSVLDSTTETSNM 487
N+L++ K V +TT++NR E A + + + ++ +V+D+ T ++
Sbjct: 204 NKLEERNKDVEKLTTKLNRVEQAHQNTYELITKIDKTVIDNIRCTKDV 251
>AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical
protein Y48G1BM.6 protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 412 SCFGSIYFCRYSINNFLDILQLIICMYFLRYVRYEIAQKYYYENSC 275
SC I F ++ N +L I+ LII M + + + QK E SC
Sbjct: 134 SCAQIIDFFKFRENRYLKIVSLIIFMQYFQMTKVYFKQK-RKEKSC 178
>AC006795-7|AAF59497.2| 199|Caenorhabditis elegans Hypothetical
protein Y50D4B.1 protein.
Length = 199
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 VIACT*RDQNRCAAKKSLAFFVRYSFRTKILRTRK*Q*C--RMSTRIPSTAKQV 668
++ C RD C+AKKSL ++ S TKI R R + C R P AK++
Sbjct: 123 LLFCPPRDCTSCSAKKSLKKWL--SGATKIARNRFMRRCLTRFPVHYPVPAKRI 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,699
Number of Sequences: 27780
Number of extensions: 324224
Number of successful extensions: 910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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