Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l21
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.7  

>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 255 GKRKSQTPGLGHGWSGEVQVNGP 323
           G +  +T G+  GW G+V  N P
Sbjct: 263 GGKVDETAGVYSGWEGQVLENMP 285


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 284 GTRLVRRGSGQWPRCTTEMP 343
           GT+L+ R    +PRC   +P
Sbjct: 688 GTQLIYRPFSHFPRCGNHLP 707


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 130 IVVLGSQGVGKTSLV 174
           + +LGS G GKT+L+
Sbjct: 107 LAILGSSGAGKTTLL 121


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 130 IVVLGSQGVGKTSLV 174
           + +LGS G GKT+L+
Sbjct: 107 LAILGSSGAGKTTLL 121


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 310 RSMAPMYYRNANAALLVFDITSMQSFTAIKGW-VKELQSNVPEAM 441
           R+M  M   NA  ALL   +   +    I+GW V+++Q    EA+
Sbjct: 444 RTMYSMKVDNAEYALLTAIVIFSERPALIEGWKVEKIQEIYLEAL 488


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 GLRHHEHAKLHSHQG 401
           G  ++ H +LHSH G
Sbjct: 80  GYGNYYHPQLHSHHG 94


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 GLRHHEHAKLHSHQG 401
           G  ++ H +LHSH G
Sbjct: 80  GYGNYYHPQLHSHHG 94


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 455 TTDNTIASGTLLCSSLTQPLMA 390
           TTDN  A   +L S L +PL A
Sbjct: 124 TTDNVAAISGVLRSLLDRPLPA 145


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 436 AMVLSVVGNKSDLES 480
           +MV S+ GN SDLE+
Sbjct: 52  SMVQSLDGNSSDLEN 66


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 GLRHHEHAKLHSHQG 401
           G  ++ H +LHSH G
Sbjct: 80  GYGNYYHPQLHSHHG 94


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 357 GLRHHEHAKLHSHQG 401
           G  ++ H +LHSH G
Sbjct: 80  GYGNYYHPQLHSHHG 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,911
Number of Sequences: 336
Number of extensions: 3474
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)