Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l13
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.60 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 475 KDVKLENGNAPGASNGTSSKSEDNA 549
           K VK  NGN    S+ + S SE+N+
Sbjct: 392 KHVKTHNGNGKKGSSDSCSDSEENS 416


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 183 CSSWF*FVKSLSFQVFNGILLIARFFLHNARCNN 82
           C   F  V  ++  +  G  LI R F H  RC N
Sbjct: 671 CHFLFHIVIGMNLIIHVGTQLIYRPFSHFPRCGN 704


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 3   VCYEFQNKF 29
           VCYE+Q++F
Sbjct: 291 VCYEYQDRF 299


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 589 GDPKSDGKAITLSQSDKWMK 648
           GDP      +TL   D W++
Sbjct: 21  GDPTERDLIVTLDDRDLWLR 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,593
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)