BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10l11 (617 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 29 2.5 At5g23880.1 68418.m02805 cleavage and polyadenylation specificit... 29 3.3 At1g11910.1 68414.m01374 aspartyl protease family protein contai... 28 4.3 At1g11410.1 68414.m01311 S-locus protein kinase, putative simila... 28 5.7 At1g55830.1 68414.m06402 expressed protein similar to M-type 9 p... 27 7.5 At4g16570.1 68417.m02508 protein arginine N-methyltransferase-re... 27 10.0 At1g28240.1 68414.m03466 expressed protein 27 10.0 >At5g07800.1 68418.m00894 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase 2 (FMO2) from Homo sapiens [GI:1834493]; contains Pfam profile: PF00743 Flavin-binding monooxygenase-like Length = 460 Score = 29.1 bits (62), Expect = 2.5 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2 Query: 299 NGETLTLSCGESRV--RHPNANKHFEVATVTCQGGDTFTNNDWITA 430 + +TL +S G S+V +HPN H ++ ++ G F + W+ A Sbjct: 244 SAKTLDISSGLSKVISKHPNLLIHPQIESLEDDGKVIFVDGSWVVA 289 >At5g23880.1 68418.m02805 cleavage and polyadenylation specificity factor identical to cleavage and polyadenylation specificity factor [Arabidopsis thaliana] SWISS-PROT:Q9LKF9 Length = 739 Score = 28.7 bits (61), Expect = 3.3 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 580 VEAGFVNWVEIVADWVTDFKNLVIIV-TGPIRTLAHV 473 +EAGF EI +W D +NLV+ TG TLA + Sbjct: 331 LEAGFAR--EIFVEWANDPRNLVLFTETGQFGTLARM 365 >At1g11910.1 68414.m01374 aspartyl protease family protein contains Pfam profiles: PF00026 eukaryotic aspartyl protease, PF03489 surfactant protein B, PF05184 saposin-like type B, region 1 Length = 506 Score = 28.3 bits (60), Expect = 4.3 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +2 Query: 398 DTFTNNDWITAPSSFLFFSCDIPPVYMSKRTNRTCHNNNKIFEVGY 535 DT ++N W+ + + +C + P Y S R++ T N K + Y Sbjct: 100 DTGSSNLWVPSSKCYFSLACLLHPKYKSSRSS-TYEKNGKAAAIHY 144 >At1g11410.1 68414.m01311 S-locus protein kinase, putative similar to receptor-like protein kinase [Arabidopsis thaliana] gi|4008008|gb|AAC95352; contains S-locus glycoprotein family domain, Pfam:PF00954 Length = 840 Score = 27.9 bits (59), Expect = 5.7 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Frame = -1 Query: 509 YCDRS--DSYACSCIPGEYHTRKIRSW 435 YCD + + + CSC+PG Y + R W Sbjct: 298 YCDSTSTEKFECSCLPG-YEPKTPRDW 323 >At1g55830.1 68414.m06402 expressed protein similar to M-type 9 protein (GI:507127) [Streptococcus pyogenes] Length = 509 Score = 27.5 bits (58), Expect = 7.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -1 Query: 380 PSQLQNACSRLDASLSTLRSLKSEFPHCLFQRFRIC 273 P L + C++L + S E P L +RFRIC Sbjct: 32 PEALVSICAQLLNLIDPSASFSDELPDSLPERFRIC 67 >At4g16570.1 68417.m02508 protein arginine N-methyltransferase-related contains weak similarity to protein arginine N-methyltransferase 2 (EC 2.1.1.-) (Swiss-Prot:P55345) [Homo sapiens] Length = 724 Score = 27.1 bits (57), Expect = 10.0 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -2 Query: 580 VEAGFVNWVEIVADWVTDFKNLVIIVTGP 494 ++ G + + + DWV D +N +I TGP Sbjct: 648 IKPGVCHGIALWMDWVMDEENSTVISTGP 676 >At1g28240.1 68414.m03466 expressed protein Length = 581 Score = 27.1 bits (57), Expect = 10.0 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 Query: 266 PTDKYGNVEIDNGETLTLSCGESRVRHPNANKHFEV 373 PT K+ N D ET+++ CG + P N F++ Sbjct: 218 PTLKHRNDSFDIKETMSVHCGFVKGPQPGRNTGFDI 253 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,551,931 Number of Sequences: 28952 Number of extensions: 259753 Number of successful extensions: 652 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 642 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 652 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1246162608 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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