Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l09
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38; Eukaryo...    92   4e-18
UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; ...    92   6e-18
UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2; Caenor...    50   3e-05
UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved ...    43   0.003
UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6; ...    37   0.22 
UniRef50_A0CBA6 Cluster: Chromosome undetermined scaffold_164, w...    34   1.2  
UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.8  
UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2; Polyan...    32   6.4  
UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5...    32   6.4  
UniRef50_UPI0000F33306 Cluster: zinc finger 804B; n=2; Theria|Re...    31   8.5  

>UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38;
           Eukaryota|Rep: UPF0197 protein C11orf10 - Homo sapiens
           (Human)
          Length = 79

 Score = 92.3 bits (219), Expect = 4e-18
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +3

Query: 84  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 263
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 264 AXXXXXXXXXXXXWVGIYV 320
           +            WVGIYV
Sbjct: 61  SLFMGFGVLFLLLWVGIYV 79


>UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; Bos
           taurus|Rep: UPF0197 protein C11orf10 homolog - Bos
           taurus (Bovine)
          Length = 79

 Score = 91.9 bits (218), Expect = 6e-18
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = +3

Query: 84  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 263
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 264 AXXXXXXXXXXXXWVGIYV 320
           +            WVGIY+
Sbjct: 61  SLFMGFGVLFLLLWVGIYI 79


>UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2;
           Caenorhabditis|Rep: UPF0197 protein Y57E12AM.1 -
           Caenorhabditis elegans
          Length = 79

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = +3

Query: 84  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 263
           ++I  M RYT+P+N A  P              A F + +VTSTK +R++ KEL ++  +
Sbjct: 1   MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query: 264 AXXXXXXXXXXXXWVGIYV 320
           +            WVGIYV
Sbjct: 61  SVFLGFGSVFLLLWVGIYV 79


>UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 148

 Score = 42.7 bits (96), Expect = 0.003
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +3

Query: 81  SLEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFV 197
           S  IESM RY SP+NPAV+PH             AWF V
Sbjct: 22  SAAIESMTRYVSPVNPAVYPHLTLILLTIGIFFMAWFLV 60


>UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 76

 Score = 36.7 bits (81), Expect = 0.22
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +3

Query: 114 SPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVAAXXXXXXXXX 293
           SPI  A++P              A FF+YE TS++ +R + KEL  S VA+         
Sbjct: 8   SPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFLGFGSLF 67

Query: 294 XXXWVGIYV 320
                G+YV
Sbjct: 68  LLLASGVYV 76


>UniRef50_A0CBA6 Cluster: Chromosome undetermined scaffold_164,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_164,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 720

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 98  NDPVHVANKPGSFSTSN-LFVARNRNILHGLVLRLRSYKY*SLKRYVQRVTFIIGGRLIF 274
           ND V     P +F  S  +F   N   ++G+ +R   Y     K YVQ    I+ GRLI+
Sbjct: 17  NDEVEYFENPDAFENSQKVFPLNNNGQIYGIYVRRLEYYI--KKNYVQEGK-IVKGRLIY 73

Query: 275 WFRNFI 292
            F N+I
Sbjct: 74  TFYNYI 79


>UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 489

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 361 YIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAATNDKSNSLNISLE 221
           ++ H+    +H  +  +P H  +N+IPKP N    N   + LN+  +
Sbjct: 51  HVYHSYPILMHQIYDGLPEHEQQNQIPKPNNPEFKNIFLHKLNLGCQ 97


>UniRef50_Q27911 Cluster: Homeodomain protein PmHox1; n=2;
           Polyandrocarpa misakiensis|Rep: Homeodomain protein
           PmHox1 - Polyandrocarpa misakiensis
          Length = 167

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 283 PKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVRCGKTAGF 122
           P P+ + +TN+++N+ + +    +  T   KN   KN   PS K  +    AGF
Sbjct: 54  PAPKTEDSTNNENNNNSSAKTTSLEATKLEKNDTYKNYSSPSQKSQQSPTAAGF 107


>UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5.4;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           MAL3P5.4 - Plasmodium falciparum (isolate 3D7)
          Length = 1816

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 21/73 (28%), Positives = 38/73 (52%)
 Frame = -2

Query: 439 FFNLMIIFIHLTKHTVSIINRGMVCCYIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAA 260
           FFN++  FI++    + + N   +    I +L+  +H  +T  P H ++NK PK   K  
Sbjct: 665 FFNIITKFINIINKNLHLYNSTDLMFLYIGSLH--IHNMYT--PNHVDQNKEPKNNQKEN 720

Query: 259 TNDKSNSLNISLE 221
            N  +++ NI L+
Sbjct: 721 NNYHNDNHNIYLK 733


>UniRef50_UPI0000F33306 Cluster: zinc finger 804B; n=2; Theria|Rep:
           zinc finger 804B - Bos Taurus
          Length = 1312

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = -1

Query: 212 TCNFVNEEPGREEYSYSEQQKG*MWKNCRVYWRRVPDH*FNFETHFYGYFRTKHYKKQNQ 33
           +C   +EE  + +   SE ++G   ++C++ W  + +    +  H YGY R KH   +NQ
Sbjct: 726 SCFCFSEELAKSDCPQSETERG---RSCKL-WESIKNE--KYSKHAYGYCREKHKLGKNQ 779


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,385,673
Number of Sequences: 1657284
Number of extensions: 7545029
Number of successful extensions: 17296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17291
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)