Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l08
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FVW2 Cluster: Putative uncharacterized protein; n=6; ...    36   1.2  
UniRef50_P58145 Cluster: Ribosomal operon-associated A protein; ...    34   3.7  
UniRef50_Q24ZE8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_A5KCC7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q4TAG8 Cluster: Chromosome 1 SCAF7335, whole genome sho...    33   8.6  
UniRef50_Q05FL9 Cluster: Homoserine dehydrogenase; n=1; Candidat...    33   8.6  

>UniRef50_A2FVW2 Cluster: Putative uncharacterized protein; n=6;
           Eukaryota|Rep: Putative uncharacterized protein -
           Trichomonas vaginalis G3
          Length = 2241

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 6   NLKQICIFCNSMSFNTYCVLSIEM*YQELHLVPQYNKHEILNKY 137
           N K+I IF     FN   +  IE+   E HL+P +NK  + NK+
Sbjct: 318 NSKKISIFTIGNKFNVNFIREIELFQSETHLLPPFNKKLLSNKW 361


>UniRef50_P58145 Cluster: Ribosomal operon-associated A protein;
           n=1; Euglena longa|Rep: Ribosomal operon-associated A
           protein - Astasia longa (Euglenophycean alga)
          Length = 519

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -3

Query: 630 NMYCNYF--FIN*SAQVILKHFFSLFYFTLHIRTQVKHSNKK 511
           N Y N +  F+N   +++LK+F  L+YFT++   +  + NKK
Sbjct: 149 NFYTNLYDIFLN-FKKILLKNFMKLYYFTINFNNKFNYMNKK 189


>UniRef50_Q24ZE8 Cluster: Putative uncharacterized protein; n=1;
           Desulfitobacterium hafniense Y51|Rep: Putative
           uncharacterized protein - Desulfitobacterium hafniense
           (strain Y51)
          Length = 268

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 242 EYYGINLKCHLNIRSHQYKNIYSKMI 165
           E+  ++LKC + I++H YK +YSK +
Sbjct: 81  EWMKLSLKCDVEIKAHMYKGLYSKQL 106


>UniRef50_A5KCC7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 219

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = -3

Query: 651 KYIRNLLNMYCNYFFIN*SAQVILKHFFSLFYFTLHIRTQVKHSNKK 511
           K I ++L M CNY++I  SAQ+  KHF  L Y+    +   K++NK+
Sbjct: 55  KRIMSMLIM-CNYYYILSSAQIYFKHFKRLKYY----KKMKKYTNKQ 96


>UniRef50_Q4TAG8 Cluster: Chromosome 1 SCAF7335, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 1 SCAF7335, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 263

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = -2

Query: 496 FKTLSSIVSKVLYITSSINNSTRLRIRNKNKTLQ 395
           FK +++IVS ++++   I NST LRI  KNK ++
Sbjct: 23  FKYVNTIVSCLIFVVGIIGNSTLLRIIYKNKCMR 56


>UniRef50_Q05FL9 Cluster: Homoserine dehydrogenase; n=1; Candidatus
           Carsonella ruddii PV|Rep: Homoserine dehydrogenase -
           Carsonella ruddii (strain PV)
          Length = 376

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 176 NKYFCTDDFLCSSDILNLFHNILFLTKGPKYIYFAMVIKLYV*VLRFIIN 325
           N Y C ++F   S+I + F+ I++L     Y+Y   + K+   +++F IN
Sbjct: 296 NNYKCLNNFFLLSNIYSCFNLIMYLKIDYNYLYIIKIFKIK--IIKFYIN 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,731,050
Number of Sequences: 1657284
Number of extensions: 10578883
Number of successful extensions: 20130
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20123
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)