Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l08
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.4  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 660 TIYKYIRNLLNMYCNYFFIN 601
           T Y +I  ++NM C  ++IN
Sbjct: 160 TAYLHIITMINMNCALWYIN 179


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 654 YKYIRNLLNMYCNYFFIN*SAQ 589
           Y +I  +LN  C+ +FIN +A+
Sbjct: 211 YYHILAMLNCLCSLWFINCTAK 232


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 660 TIYKYIRNLLNMYCNYFFIN 601
           T Y +I  ++NM C  ++IN
Sbjct: 160 TAYLHIITMINMNCALWYIN 179


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 654 YKYIRNLLNMYCNYFFIN*SAQ 589
           Y +I  +LN  C+ +FIN +A+
Sbjct: 211 YYHILAMLNCLCSLWFINCTAK 232


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 660 TIYKYIRNLLNMYCNYFFIN 601
           T Y +I  ++NM C  ++IN
Sbjct: 160 TAYLHIITMINMNCALWYIN 179


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 86  LVLHFNAQNTVSIERHRVAE 27
           +VLH     T  +E H++ E
Sbjct: 179 IVLHMKEDQTEFLEEHKIKE 198


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 616 LFFHKLIGSSNFKTFFFLVL 557
           LFF KLIG     TF   +L
Sbjct: 382 LFFFKLIGDVPIDTFLMEML 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,049
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)