Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l08
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical
           protein W05H9.4 protein.
          Length = 780

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 179 KYFCTDDFLCSSDILNLFHNILFLTKGPKYIYFAMV 286
           KY CT   +   DI  L H+I+  TKG +Y Y+  +
Sbjct: 234 KYLCTSR-IAQMDITTLRHDIIAATKGKEYKYYTHI 268


>AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical
           protein F19B2.6 protein.
          Length = 807

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 481 SIVSKVLYITSSINNSTRLRIRNKNKTLQWPRLQTRK 371
           +I+SKV Y+  +  N  +LR+  +    QW + +T K
Sbjct: 644 NIISKVDYLMKTDRNLKKLRMAKEVSEKQWEQFETDK 680


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,981,627
Number of Sequences: 27780
Number of extensions: 279157
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)