Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10l01
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   9.2  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    23   9.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 395 WRS*YLWPGLSDMFTDKSNYPRHVRRASATHPHRFFIFTLY 273
           W   YL+  L D+  + S  P H RR S + P      +LY
Sbjct: 403 WSLHYLYNRLRDISEETSALPSHPRRRSNSLPIPQIEISLY 443


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 294 PVRVRRARPSDVPRVIRFVREHV 362
           P +VR+  P  V   IRF  EH+
Sbjct: 36  PRKVRKLLPHHVEARIRFAEEHL 58


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 417 RTKP-DLILEELIPLARFVGHVHGQIELPEARPTG 316
           RT P  L++  ++ +A F G+ + Q+EL +A   G
Sbjct: 143 RTTPIQLLIMGILEIAIFAGNEYLQLELVKAADVG 177


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 380 LWPGLSDMFTDKSNYPRHVRRASA 309
           LW G S ++ D ++YP +    SA
Sbjct: 824 LWDGYSLLYVDGNDYPHNQDLGSA 847


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,856
Number of Sequences: 2352
Number of extensions: 13744
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)