Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k23
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 326 1e-89
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 326 1e-89
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 319 1e-87
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 202 2e-52
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 8e-52
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 175 3e-44
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 133 1e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 131 4e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 130 1e-30
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 129 2e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 101 4e-22
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 9e-21
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 9e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 48 9e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 3e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 6e-04
SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11) 30 1.5
SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22) 29 2.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 4.5
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 4.5
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 29 4.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 326 bits (800), Expect = 1e-89
Identities = 152/172 (88%), Positives = 152/172 (88%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 328
MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 329 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 508
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 509 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
RKEAE CDCLQGFQ ISKIREEYPDRIMNTFSVVPS
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 326 bits (800), Expect = 1e-89
Identities = 151/173 (87%), Positives = 153/173 (88%)
Frame = +2
Query: 146 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 325
+MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 326 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 505
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 332
Query: 506 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
VRKEAE CDCLQGFQ ISKIREEYPDRIMNTFSVVPS
Sbjct: 333 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 385
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 319 bits (783), Expect = 1e-87
Identities = 145/172 (84%), Positives = 152/172 (88%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 328
MREIV +Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 329 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 508
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 509 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
RKEAE CDC+QGFQ ISKIREEYPDRIMNTFS+VPS
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPS 172
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 202 bits (494), Expect = 2e-52
Identities = 95/116 (81%), Positives = 97/116 (83%)
Frame = +2
Query: 317 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 496
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 497 LDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
LDVVRKEAE CDC+QGFQ I KIREEYPDRIMNTFSVVPS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPS 117
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 200 bits (488), Expect = 8e-52
Identities = 90/92 (97%), Positives = 90/92 (97%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 328
MREIVH Q GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 329 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 424
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 175 bits (426), Expect = 3e-44
Identities = 78/118 (66%), Positives = 91/118 (77%)
Frame = +2
Query: 311 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 490
TGG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 491 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
++ DV+RKEAE CDC+QG Q +SKIREEYPDRI++ FSVVPS
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPS 128
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 133 bits (321), Expect = 1e-31
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 322
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 323 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 502
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 503 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 174
Score = 132 bits (318), Expect = 3e-31
Identities = 66/175 (37%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 146 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 319
E RE + I GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 433 EERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 492
Query: 320 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 499
K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 493 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVL 552
Query: 500 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
D +RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 553 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 607
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 132 bits (319), Expect = 2e-31
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 322
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 323 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 502
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 503 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+GC LQGF + ++ +Y + F++ P+
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 174
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 131 bits (317), Expect = 4e-31
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 322
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 323 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 502
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 503 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 759
Score = 130 bits (313), Expect = 1e-30
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Frame = +2
Query: 152 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 325
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 326 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 505
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 506 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 186 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 238
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 152 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 325
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 326 VPRAILVDLEPGTMDSV 376
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 130 bits (314), Expect = 1e-30
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Frame = +2
Query: 152 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 325
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 326 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 505
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 506 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPA 173
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 130 bits (313), Expect = 1e-30
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Frame = +2
Query: 152 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 325
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 326 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 505
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 506 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+GC LQGF + ++ +Y + F++ P+
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPA 545
Score = 128 bits (309), Expect = 4e-30
Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Frame = +2
Query: 146 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 319
E RE + + GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 804 EERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 863
Query: 320 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 499
K+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 864 KHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVL 923
Query: 500 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
D +RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 924 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPA 978
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 130 bits (313), Expect = 1e-30
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 146 EMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 319
E RE V I GQ G Q+G WE+ EHGI P G D + + N +++E G
Sbjct: 418 EERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 477
Query: 320 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 499
K+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VL
Sbjct: 478 KHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVL 537
Query: 500 DVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
D +RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 538 DRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPA 592
Score = 111 bits (268), Expect = 4e-25
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Frame = +2
Query: 194 IGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGTM 367
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 368 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 547
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 548 QXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+ ++ +Y + F++ P+
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 159
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 129 bits (311), Expect = 2e-30
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 322
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 323 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 502
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 503 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
RK A+ C LQGF + ++ +Y + F++ P+
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPA 174
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 101 bits (243), Expect = 4e-22
Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 322
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 323 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 502
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 503 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RK A+ C LQGF + ++ +Y + F+V P+
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPA 164
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/128 (35%), Positives = 70/128 (54%)
Frame = +2
Query: 281 ERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 460
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 461 HYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIM 640
HYT G E +D LD +RK A+ C LQGF + ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 641 NTFSVVPS 664
F+V P+
Sbjct: 132 LEFAVYPA 139
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 97.5 bits (232), Expect = 9e-21
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +2
Query: 302 NEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 481
+EA GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 482 LVDSVLDVVRKEAEGCDCLQGF 547
+V+ V+D +RK + C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/79 (53%), Positives = 53/79 (67%)
Frame = +2
Query: 428 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXIS 607
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ +S
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 608 KIREEYPDRIMNTFSVVPS 664
KIREEYPDR++++F V+PS
Sbjct: 62 KIREEYPDRLVSSFCVLPS 80
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/99 (34%), Positives = 53/99 (53%)
Frame = +2
Query: 368 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 547
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 548 QXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+ ++ +Y + F++ P+
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 111
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.9 bits (166), Expect = 9e-13
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +2
Query: 374 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 553
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 554 XXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+ ++ +Y + F++ P+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPA 99
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 149 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 322
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 323 YVPRAILVDLEPGTMDSVR 379
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Frame = +2
Query: 158 IVHIQGGQCGNQIGAKFWEVISDE------HGIDPTGTYHGDSDLQLERINVYYNEATGG 319
IV +Q GQCGNQIG + +++I ++ + T ++ + E + ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 320 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 490
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 491 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPD 631
VLD+V++E E CD L GF + +R+ YP+
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPN 169
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +2
Query: 374 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQX 553
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 554 XXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+ ++ +Y + F+V P+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPA 99
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 374 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 514
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 374 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 514
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 506 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
+RKEAE CD +QGFQ + ++EEYPDRI+++ SV PS
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPS 53
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 116 KIHSII*FTKEMREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--- 286
+IH + + MRE + I GQ G QIG WE+ EHGI P G H SD +R
Sbjct: 185 EIHPLNCSIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDD 242
Query: 287 -INVYYNEATGGKY 325
+ +++E GK+
Sbjct: 243 SFSTFFSETASGKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 206 FWEVISDEHGIDPTGTYHG-DSDLQLERINVYYNE 307
FWEVI++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/130 (30%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Frame = +2
Query: 176 GQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLE 355
GQCGNQIG + ++ + P H D L R + VD E
Sbjct: 9 GQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCVDSE 47
Query: 356 PGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRK 514
+ S R G GQ R N + G+ G GNN+A G++ G L+ +D +RK
Sbjct: 48 SKVIASNRRSDGVHGQ-NRDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRK 106
Query: 515 EAEGCDCLQG 544
E E CD G
Sbjct: 107 EVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 332 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 451
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11)
Length = 587
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 152 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGD-SDLQLERINVYYNEATGGKYV 328
++I++IQG + ++W + G+ P + S LQLE N NE K +
Sbjct: 133 QQILYIQGRAAETRATQQWWSAVKPVAGMTPASGHESVLSHLQLEGYNEKSNEQELAKAI 192
Query: 329 PRAILVDLE 355
A L +E
Sbjct: 193 NSAFLEPME 201
>SB_51928| Best HMM Match : HEAT (HMM E-Value=4.9e-22)
Length = 1115
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +3
Query: 192 RLGLSSGKLYPMSMASIRPERITETPTSSWSASTCTI-TRRLEESTCLGLSLWT*SPGQW 368
R+G + P + S R R ETP S +T I T + + L + + T +PGQ
Sbjct: 189 RMGAETPGATP-TPGSKRRSRWDETPASQMGGTTPMIGTSGVTPAGALAMQMHTPTPGQL 247
Query: 369 TLYAPDHSVRSSVRTTLSLGNRVLATTGLRVTTPK 473
P+ + NRVL+ L PK
Sbjct: 248 VSMTPEQMQAYRWEREIDERNRVLSDDELNQLFPK 282
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 488 DSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
D+ D +R AE CD LQGFQ + +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 488 DSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPS 664
D+ D +R AE CD LQGFQ + +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 246 PERITETPTSSWSASTCTITRRLEE 320
P R+ +TPT +W+ T T RLE+
Sbjct: 1125 PTRVRQTPTPAWNPYTDTDVNRLEQ 1149
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.3 bits (60), Expect = 5.9
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 228 SMASIRPERITET-PTSSWSASTCTITRRLEESTCLGLSLWT*SPGQWTLYAPDHSVRSS 404
S+A+ PE T + T++ +T ++ E+T S T +P T AP+ + S
Sbjct: 58 SLATTAPETTTASLVTTAPETTTASLATTAPETTTA--SFLTTAPEATT--APETTTASL 113
Query: 405 VRTTLSLGNRVLATTGLRVTT-PKA 476
V T LATT L VTT P+A
Sbjct: 114 VTTAPEATTASLATTALLVTTAPEA 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,030,715
Number of Sequences: 59808
Number of extensions: 408895
Number of successful extensions: 1042
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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