Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k22
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58757-9|AAM75377.1|  503|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U58757-8|AAC47918.3|  506|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U58757-9|AAM75377.1|  503|Caenorhabditis elegans Hypothetical
           protein C01B10.6b protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 368 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 526
           ++G QY +C++    G+    TLP P       AC  +  +P+    + IC  Q
Sbjct: 329 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 382


>U58757-8|AAC47918.3|  506|Caenorhabditis elegans Hypothetical
           protein C01B10.6a protein.
          Length = 506

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 368 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 526
           ++G QY +C++    G+    TLP P       AC  +  +P+    + IC  Q
Sbjct: 332 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,223
Number of Sequences: 27780
Number of extensions: 309352
Number of successful extensions: 737
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)