Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k21
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 34 0.100
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 34 0.13
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 33 0.17
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23) 32 0.40
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 32 0.53
SB_29297| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 32 0.53
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 31 0.93
SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 1.6
SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6) 30 1.6
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_25898| Best HMM Match : rve (HMM E-Value=1) 30 1.6
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_50513| Best HMM Match : Lig_chan (HMM E-Value=0.0083) 30 2.1
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 30 2.1
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 29 2.8
SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11) 29 2.8
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 2.8
SB_55330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_26066| Best HMM Match : RNA_pol_delta (HMM E-Value=3.1) 29 3.7
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48) 29 3.7
SB_57931| Best HMM Match : Vicilin_N (HMM E-Value=0.96) 29 4.9
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037) 29 4.9
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 29 4.9
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_34107| Best HMM Match : DUF16 (HMM E-Value=0.42) 29 4.9
SB_28246| Best HMM Match : M (HMM E-Value=0.0007) 29 4.9
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 29 4.9
SB_22332| Best HMM Match : bZIP_2 (HMM E-Value=0.99) 29 4.9
SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99) 29 4.9
SB_15367| Best HMM Match : DUF1212 (HMM E-Value=0.98) 29 4.9
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 28 6.5
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 6.5
SB_20418| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 6.5
SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3) 28 6.5
SB_35353| Best HMM Match : Arm (HMM E-Value=6.6e-27) 28 6.5
SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3) 28 6.5
SB_45095| Best HMM Match : DUF1168 (HMM E-Value=0.74) 28 8.6
SB_1253| Best HMM Match : TraD (HMM E-Value=1.5) 28 8.6
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 28 8.6
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Frame = +3
Query: 177 AVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADV--DDIKEKKFLDEAIKAI 350
AV + + + S D++ D+T+ + D+S E+G + V DD+++ LDE +K +
Sbjct: 183 AVDLSLEGSNSGDINQDDTAASMDTSEADLSKENGLSVSLFVHTDDVQDD--LDEDLKDV 240
Query: 351 LDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDI 530
P P +D+ + + E + + +D DN + + KA S +SD
Sbjct: 241 QTPAKSAPNKEDKSKDESTEEKEESATKAEVD------DNKKAK----ADKASISIISDE 290
Query: 531 NNETKKNKMVRITAEEDEIKK 593
E+K + + + + KK
Sbjct: 291 KEESKDSTKKTDSKKPSDTKK 311
>SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/71 (19%), Positives = 36/71 (50%)
Frame = +3
Query: 465 DNLSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEEDEIKKQYWNILKTKYLRDDTVK 644
D++ +E K S++ W Y + ++N ++ +R+T+ + + +W + KY D
Sbjct: 352 DDIRIETNKNSERVTWLYPTFVDNSLPPDQPIRVTSNRNPGVRFHWGKYQVKYTAFDQAN 411
Query: 645 NDRNYQRKIRI 677
N+ + +++
Sbjct: 412 NNATCEFYVQV 422
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 34.3 bits (75), Expect = 0.100
Identities = 24/110 (21%), Positives = 48/110 (43%)
Frame = +3
Query: 252 KTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKS 431
KTL +++ ELE ++ EK L E K +LD I DE+E + + D++ +
Sbjct: 657 KTLQSNEKREEELELLLETRTEK--LSECKKRLLDLEEIIESKDDEIEQLQKRFDDMKNA 714
Query: 432 NISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEED 581
+ + +E+ K +K + ++T K+ + E++
Sbjct: 715 TSADGKRTIALKEKDIEIQKLQEKLEGVSKASEQSKTHAQKLESLNKEQE 764
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 351 LDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDI 530
LDP + +L K E+NK+ L +FL E L + T +A+ + ++
Sbjct: 1719 LDPFTSEQGTKTQLGQLKALQREINKNYSKLRTFLQEGKRLRESLTSTEYQAVQKTLDEL 1778
Query: 531 NNETKKNKMVRITAEEDEIKKQYWNIL 611
N+ ++ +R + D+I+ N L
Sbjct: 1779 NSRWQQTSHLRPPDDNDDIRNSSSNTL 1805
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 33.5 bits (73), Expect = 0.17
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Frame = +3
Query: 243 KNNKTLDVSDESGHELEADVDDIK---EKKFLDEAIKAILDPHAFIPKNQDELESYKLQL 413
KN + +E ELE +IK E+K ++ + + I D L+ +
Sbjct: 520 KNQEQQQRIEELTCELELAYQEIKNTEERKSVENSEELIALKADLERAKYDNLKLANYRK 579
Query: 414 DELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNK------MVRITAE 575
+E ++ N ++ + E+ +L+ + +T QK+ ++ +E KK K E
Sbjct: 580 EENDRLNETIRTLQDEVKSLTTRLDETKQKS--EELAACKSELKKAKEEIEKAWTLYDKE 637
Query: 576 EDEIKKQYWNILKTKYLRDDTVKNDRNYQ 662
+D ++K W + T L++ ++NDR YQ
Sbjct: 638 KDRLEKINWQM--TDELQEKELENDRQYQ 664
Score = 32.3 bits (70), Expect = 0.40
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 1/167 (0%)
Frame = +3
Query: 189 QFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
Q+QT D+ D S + + EL A ++K+ K +E KA A
Sbjct: 662 QYQT--IIDLKDDLKSLMTRLEETKQNQNGSEELAACRSELKKAK--EEIEKA----WAL 713
Query: 369 IPKNQDELESYKLQL-DELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETK 545
K +D LE Q+ DEL S + LS E+ A S + E +
Sbjct: 714 YDKEKDRLEKLNWQMTDELKSLKASPKEIKQNQNGLSEELA-----ACKSELEKAKEEIE 768
Query: 546 KNKMVRITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKIRIIKE 686
K E+D ++K W + T L++ ++NDR YQ+ + + E
Sbjct: 769 K-AWALYDKEKDRLEKINWQM--TDELQEKELENDRQYQKIVDLKDE 812
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 32.7 bits (71), Expect = 0.30
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 DMSAD-ETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDE 389
D+S D E L+ + EL+ +D+ EK +++ A + I + +
Sbjct: 525 DISRDAEEQRQHQQGELEALKKEHQELKEKSEDL-EKNLEEQSNMAA----SSIEQGETS 579
Query: 390 LESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVRIT 569
L+S K +LD+ K SLDS + S KT Q V D+ +E K K V++
Sbjct: 580 LKSLKKELDQKTKQATSLDSKNKGLQ--SQLTAKTKQ------VKDLQHENKSLK-VKVN 630
Query: 570 AEEDEIKKQYWNI--LKTKYLRDDTVKNDRNYQ 662
A+E ++ K+ + K + +++ + D+N +
Sbjct: 631 AQEKQLSKKETEVQLKKLETMQNTLEEKDKNME 663
>SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23)
Length = 172
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 252 KTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKS 431
KTL +++ ELE ++ EK L E K +LD I DE+E + + D++ +
Sbjct: 56 KTLQSNEKREEELELLLETRTEK--LSECKKRLLDLEEIIESKDDEIEQLQKRFDDMKNA 113
Query: 432 NISLDSFLSEMDNLSLEVCKTSQK 503
+ + +E+ K +K
Sbjct: 114 TSADGKRTIALKEKDIEIQKLQEK 137
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 32.3 bits (70), Expect = 0.40
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 231 TSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILD-PHAFIPKNQD-ELESYK 404
T K L + E E+E ++++ K++K E KA LD + +NQ+ ELE K
Sbjct: 548 TDYKNTEKALLIEQEKLSEMEKELENSKDEKVKIEQEKADLDIAIENLKRNQEIELEELK 607
Query: 405 LQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDI 530
+++L + N L + D E+ + +K + Y +I
Sbjct: 608 DNIEDLERENKKLKGEIECND----EMIQYQEKRINQYAEEI 645
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 291 EADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDN 470
E D D + K+ LDE + + D + K QD+ +S K +D + + N +L SE D
Sbjct: 1654 EKDKLDDENKQLLDEKSREVTDLKGEVKKAQDDADSVKRLVDAIIEENDTLKQ--SEHDL 1711
Query: 471 LSLE 482
L+++
Sbjct: 1712 LAIQ 1715
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 312 KEKKFLDEAIKAILDPHAFIPKNQDELESYKL-QLDELNKSNISLDSFLSEMDNLSLEVC 488
KEK LD +++ + + +N E+E Y L + +E I E D L +V
Sbjct: 529 KEKSGLDRKYSELVEANENLRENLSEVEGYLLREREEKVSLQIKTVQVEEEKDALDAKV- 587
Query: 489 KTSQKALWSYVSDINNETKKNKMVRITAEED 581
K Q+AL ++ + E KK KM+ E+D
Sbjct: 588 KELQQALDDFIWTTDKE-KKAKMMDSPQEDD 617
>SB_29297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 285 HVHFHRRHLKFYYFSVCSSRLLTYLTKDLFGTE 187
H H RH KF Y+S+ R LT ++K G+E
Sbjct: 68 HAFIHSRHRKFVYWSILLVRYLTLMSKVQEGSE 100
>SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 31.9 bits (69), Expect = 0.53
Identities = 34/134 (25%), Positives = 60/134 (44%)
Frame = +3
Query: 312 KEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCK 491
+E K L+E K DP F+ K Q+ + ++ + L+ LS D + +
Sbjct: 141 EELKKLEEYEKGGRDPSEFL-KWQETMRKNDMERELAEIEKRRLEGKLSYEDAILAR--Q 197
Query: 492 TSQKALWSYVSDINNETKKNKMVRITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKI 671
K VS+I + ++ + TAEE+E +K+ +IL++K +D + + K
Sbjct: 198 NLIKDNKQKVSEIKKQLRERLALLKTAEEEEKEKKRDSILQSKVEKDQLLMDTLETIAKH 257
Query: 672 RIIKERGTNVQMPQ 713
R K R V+ Q
Sbjct: 258 RADKSRQAAVRAEQ 271
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +3
Query: 291 EADVDDIKEKKFLDEAI--KAILDPHAFIPKNQDEL----ESYKLQLDELNKSNISLDSF 452
EAD + +++KK LD+ I + IL + + DEL E K+Q LNK I
Sbjct: 364 EADAERMRQKKELDQVIGERDILGTQ--LVRRNDELALLYEKIKIQQSTLNKGEIQYRQR 421
Query: 453 LSEMDNLSLEVCK 491
L ++ L LE+ K
Sbjct: 422 LEDIRLLKLEIKK 434
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 31.9 bits (69), Expect = 0.53
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Frame = +3
Query: 195 QTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIP 374
+ NP S +E P N +D + H D +KE L EAI+ ++ +
Sbjct: 241 EINPKSSPPKEEK--PSNESDSQKADNTEHFF--DKQAVKESAELSEAIENLIGSNICCY 296
Query: 375 KNQDELESYKLQLDELNKSNISLD--SFLSEMDNLSLEVCKTSQKALWSYVSDINNETKK 548
+ +E + + + E N + +S D + +S S E +A S + + +K+
Sbjct: 297 EQDEENTTSDIDMKEQN-TGVSPDWSASVSASATGSNEEKPAKIEATLSKIEE-EKLSKQ 354
Query: 549 NKMVRITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKI 671
++ + ++ +E+ + +T R +TVK DR RK+
Sbjct: 355 SQRIMKASKNEELIAEVQEEKETLQSRVETVKPDRPKSRKL 395
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 189 QFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEK-KFLDEAIKAILDPHA 365
Q +S++S+ + +TLD +DE ++E ++D KE+ FL E ++ +
Sbjct: 426 QRSNTSASEVSSLRARVQELEQTLDDADEHIKKIETELDGSKEQMMFLQETVRRECEERL 485
Query: 366 FIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSL 479
+ + E + L L +++S S S + + SL
Sbjct: 486 ELTEALSEARTQLLSLKRNPSTSLSRTSLNSSLSSGSL 523
>SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 180 VSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAI 350
VS Q QT + S + +S+ K+N + D+S + + + + IK E++K +
Sbjct: 354 VSKQKQTTNNKQFSKESSSSSKDNCSADISSSTESSYKNEAETIKNGASFKESVKTV 410
>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
Length = 867
Score = 31.1 bits (67), Expect = 0.93
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Frame = +3
Query: 312 KEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCK 491
K +K +E + IL D+++ K + + KS + + + ++ + C
Sbjct: 568 KMEKKQEETMVEILTAKNNRKHYSDKVQENKDAISKAEKSVVEMTRKIESTTAMAAQYCG 627
Query: 492 TSQKA-LWSYVSDINNET-KKNKMVRITAEE------DEIKKQYWNILKTKYLRDDTVKN 647
+ K V + +E +K K +R ++ D+I KQY++ LK D++KN
Sbjct: 628 SPDKIETKKTVKSLESEILQKEKCIRTEEQKKNHGTHDQITKQYFDALKELEHIKDSLKN 687
Query: 648 DRNYQRKI-RIIKER 689
R + +++ ++K+R
Sbjct: 688 LRRFNKRLTNMMKKR 702
>SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 345 AILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFL 455
AI+ A+ K Q+EL K +LD+ N+ N SL + L
Sbjct: 451 AIIKLDAYAKKQQEELVKLKAELDDANEKNRSLQTTL 487
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/97 (20%), Positives = 49/97 (50%)
Frame = +3
Query: 216 MSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELE 395
++A++ +T + D+ ++ ++ ++EK L+ A+ ++ +P + DEL+
Sbjct: 1465 LTANQRHNHLEARTEALEDDKQRLKKSQLEAMEEKSRLNVAMVESVESE--VPFDFDELD 1522
Query: 396 SYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKA 506
K D+ SLD+ L E+++ ++ K ++A
Sbjct: 1523 GAKRDRDKFEMEKTSLDNRLREVEDDLIDKQKQKERA 1559
>SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6)
Length = 700
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 195 QTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVD-DIKEKKFLDEA 338
+T+P D+ + + S +NK+ D+S +LE D+ D +F+D A
Sbjct: 241 ETDPDPDLDSLDKSKKDSNKSRDISQSHNTKLEQDIGYDRTRIEFIDAA 289
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +3
Query: 339 IKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSY 518
+K + A + + DEL+ + K SLD LS+M NL + Q A + +
Sbjct: 1260 LKGVWSELAKVWEKVDELKERPWLSVQPRKLRQSLDELLSDMKNLP---ARLRQYASFEF 1316
Query: 519 VSDINNETKKNKMVRITAEEDEIKKQYWNIL 611
V K M+ + + + +K+++W L
Sbjct: 1317 VQKTIKTYLKMNMLIVELKSEALKERHWKTL 1347
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 387 ELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDI 530
ELE K+++D L+ N L+S LSE +V KTS+ L S +S I
Sbjct: 1904 ELEIMKIRVDVLSSENNKLNSKLSETSTFLKDV-KTSKTRLESDLSSI 1950
>SB_25898| Best HMM Match : rve (HMM E-Value=1)
Length = 714
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 225 DETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILD 356
D++S+P+ +K L + E E+ + K K +DE IKAI+D
Sbjct: 269 DQSSSPEMDKKLSMVLERTREVGLKFNSSKVKLRVDEKIKAIID 312
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Frame = +3
Query: 189 QFQTNPSSDMSADETSTPKN---NKTLDVSDESGHELEADVDDIKEKKFLDEA-IKAI-- 350
+ + N +D++ DE + K+ +++ DV ++ ++ DV+D +++ DE I+++
Sbjct: 1236 KLEPNHFADLTDDEFKSYKDALDDESKDVMNDHDDVIDDDVNDETQEEEEDEPYIRSMNR 1295
Query: 351 ------LDPHAFIPKNQDELESYKLQLDELNK 428
L+P+ F DE +SYK LD+ +K
Sbjct: 1296 RSLPYKLEPNHFADLTDDEFKSYKGALDDESK 1327
>SB_50513| Best HMM Match : Lig_chan (HMM E-Value=0.0083)
Length = 417
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 528 INNETKKNKMVRITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKIRIIKER 689
+NNET+ +K+ T E+ +YW ++ ++ +T+K Q K+ I+ R
Sbjct: 59 VNNETRASKITMDTEEKIFWNGEYWGDIQCEFRGKETIKAP-PVQHKVLIVTVR 111
>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
Length = 320
Score = 29.9 bits (64), Expect = 2.1
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Frame = +3
Query: 309 IKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVC 488
+K+KK +D + D + K L+ + ++ +L L+S +E + LS +
Sbjct: 146 LKDKK-IDGLESRLEDLESANNKLHHSLKFKEEKISDLEGQIDELESLAAEKNRLSQSLE 204
Query: 489 KTSQKA--LWSYVSDINNETKK------NKMVRITAEEDEIKKQYWNILKTKYLRDDTVK 644
+ +K L + V D+ ET++ K RI ED I + + ++ LR+D +
Sbjct: 205 QKMKKIMELENRVEDLTCETQRLQNSVDQKAKRIQTLEDRISELEQLLASSQELREDIRQ 264
Query: 645 NDRNYQRKIRIIKER 689
D RI+ ER
Sbjct: 265 KDEKISTLNRIVLER 279
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +3
Query: 456 SEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEEDEIKKQYWNILKTKYLRDD 635
+ ++NL + + + K +KN+ R+ EE + +K+ LK + L+D
Sbjct: 69 ASVENLDMSLQQRRDKVKQMREKQAEERKRKNEERRLAFEERKRQKEAEEKLKWETLKDQ 128
Query: 636 TVKNDRNYQRKIRII 680
T K RK+ I+
Sbjct: 129 TAKQRPGTGRKLPIV 143
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 135 IVARFICLVGIIST-AVSVQFQTNPSSDMSADETSTPKN--NKTLDVSDESGHELEADVD 305
++ + L+G++ T A + T SSD DE+ST + T D +SG E ++ D
Sbjct: 44 LLIALVFLLGVLLTEAKPLSPGTTESSDEDGDESSTKDKAVDTTKDEDSKSGDESDSSAD 103
Query: 306 D 308
D
Sbjct: 104 D 104
>SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11)
Length = 285
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +3
Query: 249 NKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNK 428
++ LD+S E +E + +V + K K +DEA K + + + + E+ K ++DE NK
Sbjct: 190 DRDLDLSKEV-NETKKEVQETKTK--VDEANKEVHEVKGKVDETNKEVHEVKGKVDETNK 246
Query: 429 SNISLDSFLSEMDNLSLEVCKTSQK 503
+ ++D + EV + +K
Sbjct: 247 ---EVHEVKGKLDETNKEVHEVKEK 268
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 213 DMSADETSTPKN-NKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDE 389
D+S + T K +T DE+ E V ++K K +DE K + + + + E
Sbjct: 194 DLSKEVNETKKEVQETKTKVDEANKE----VHEVKGK--VDETNKEVHEVKGKVDETNKE 247
Query: 390 LESYKLQLDELNKSNISLDSFLSEM 464
+ K +LDE NK + +SEM
Sbjct: 248 VHEVKGKLDETNKEVHEVKEKVSEM 272
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 291 EADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLD-ELNKSNISLDSFLSEMD 467
E +V+D+K + + + L H + K+ E E K L ELN+S ++SF S+++
Sbjct: 3596 EREVEDLKHRLLRETEQEKKL--HDGLKKDLYEAEKQKSDLQRELNQSRYEIESFKSKVE 3653
Query: 468 NLSLEVCKTSQKALWSYVSDINNETK-KNKMVRITAEEDEIKKQYWNILKTKYLRDDTVK 644
+ +E K ++ + E NK +R EE K+ LK D + K
Sbjct: 3654 LIEIENRKWEEER-----RKLKEEANYANKELRSIQEELRTLKREMKSLKA----DASRK 3704
Query: 645 NDR 653
ND+
Sbjct: 3705 NDK 3707
>SB_55330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 126 IKMIVARFICLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGH 284
I I+ I ++ IIST ++ +++PSS S +S ++++ SD H
Sbjct: 11 INTIIITIIIII-IISTTINTIIRSSPSSSSSPPSSSPSSSSRSTPSSDHDHH 62
>SB_26066| Best HMM Match : RNA_pol_delta (HMM E-Value=3.1)
Length = 240
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 195 QTNPSSDMSADETSTPKNNKTLDVS--DESGHELEADVDDIKEKKFLDEAIKA-ILDPHA 365
+ + DM+AD+ K + DES E E+D DD + +DEA +A I
Sbjct: 132 EDSDDEDMAADDGDEDNEKKPCKETKEDESDSEDESDDDDEGDDDAVDEAFRAEIKAALG 191
Query: 366 FIPKNQDELESYKLQLDELNKSNISLDSFLS 458
+ D ES +LD+ ++ + LD LS
Sbjct: 192 SAAADTDSEESSGEELDD--EAMMQLDDALS 220
>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 352 NIAFMASSRNFFSLMSSTSASNSCPLSSETSKVLLFF 242
+ F+ RNFF M+ +SC LSS TS + L F
Sbjct: 302 SFGFLPLLRNFFGRMTRAPQDSSC-LSSNTSNISLHF 337
>SB_6447| Best HMM Match : DUF164 (HMM E-Value=0.48)
Length = 598
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 228 ETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKL 407
E T NN L +E + E ++++ + ++ L+E + AFI K + ELE K
Sbjct: 350 EYITDINNINLQ-REEQKRKFEEELEEFQNEEKLEERRQRYHVHEAFITKQELELEERKK 408
Query: 408 QLDELNKSNISLDSFLSEMD 467
Q E ++ + LD+ E++
Sbjct: 409 QAIEQDRED--LDTLSQELE 426
>SB_57931| Best HMM Match : Vicilin_N (HMM E-Value=0.96)
Length = 203
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 333 EAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALW 512
+ I+ I D A + + +DE ES + +DEL K SLD LSE + E + Q+ L
Sbjct: 81 DRIREIEDLDAQLKRVRDESESKEGMIDELRK---SLDKALSEGREQANETAQL-QEDLR 136
Query: 513 SYVSDIN--NETKKNKMVRITAEEDEI 587
VS I E + V + A +D I
Sbjct: 137 MAVSAIQQLEEERDQLQVELQARDDLI 163
>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
Length = 396
Score = 28.7 bits (61), Expect = 4.9
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Frame = +3
Query: 252 KTLDVSDESGHELEADVDDIKEK-----KF---LDEAIKAI---LDPHA-FIPKNQDELE 395
K + DE+ + E + D+K+K KF LD IK + ++P I +++++
Sbjct: 174 KEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQIEPRENDIKAMKEQIQ 233
Query: 396 SYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETK--KNKMVRIT 569
+ +L+ +K N SL+ ++E+ L L+ V D+ K K +
Sbjct: 234 EMESELERFHKQNTSLELNITEL-RLKLKATDKEMHQERQKVRDVEAVVKRFKTDLYNCV 292
Query: 570 AEEDEIKKQYWNI--LKTKYLRDDTVKN---DRNYQRK 668
E KK N+ L KY++D+T ++ D + QR+
Sbjct: 293 GFIQEPKKLKENVKALYQKYVQDETPESAGVDADIQRE 330
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 28.7 bits (61), Expect = 4.9
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Frame = +3
Query: 252 KTLDVSDESGHELEADVDDIKEK-----KF---LDEAIKAI---LDPHA-FIPKNQDELE 395
K + DE+ + E + D+K+K KF LD IK + ++P I +++++
Sbjct: 620 KEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQIEPRENDIKAMKEQIQ 679
Query: 396 SYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETK--KNKMVRIT 569
+ +L+ +K N SL+ ++E+ L L+ V D+ K K +
Sbjct: 680 EMESELERFHKQNTSLELNITEL-RLKLKATDKEMHQERQKVRDVEAVVKRFKTDLYNCV 738
Query: 570 AEEDEIKKQYWNI--LKTKYLRDDTVKN---DRNYQRK 668
E KK N+ L KY++D+T ++ D + QR+
Sbjct: 739 GFIQEPKKLKENVKALYQKYVQDETPESAGVDADIQRE 776
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 243 KNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDEL 422
+ K + + + E + +VD+ K K +DE K + + + + + E++ K ++DE
Sbjct: 1295 ETKKEVQETKKDVQETKKEVDETKTK--VDETKKEVQETKKDVQETKKEVQETKTKVDET 1352
Query: 423 NK 428
NK
Sbjct: 1353 NK 1354
>SB_34107| Best HMM Match : DUF16 (HMM E-Value=0.42)
Length = 171
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 249 NKTLDVSDESGHELEADVDDIK----EKKFLDEAIKAILDPHAFIPKNQDELESYKLQLD 416
N+T+ DE EL+A+VD +K E++ L E ++ + +++D LES LD
Sbjct: 58 NQTMKAKDEKITELQAEVDRLKLEASEREMLMEHLQNKCKILDEVARHRDALESVLACLD 117
Query: 417 ELNKSNISLD 446
+ + + D
Sbjct: 118 IIQEPDYDAD 127
>SB_28246| Best HMM Match : M (HMM E-Value=0.0007)
Length = 1121
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 333 EAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALW 512
+ I+ I D A + + +DE ES + +DEL K SLD LSE + E + Q+ L
Sbjct: 81 DRIREIEDLDAQLKRVRDESESKEGMIDELRK---SLDKALSEGREQANETAQL-QEDLR 136
Query: 513 SYVSDIN--NETKKNKMVRITAEEDEI 587
VS I E + V + A +D I
Sbjct: 137 MAVSAIQQLEEERDQLQVELQARDDLI 163
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/87 (19%), Positives = 48/87 (55%)
Frame = +3
Query: 210 SDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDE 389
+DMS + + K L+ S + G + + ++D+K K E + + + + I K + +
Sbjct: 62 TDMSNLQARLNQAEKALEQSRKEGAKKDKTIEDLKNKN--SELEQNVQNLNNEIIKLEAK 119
Query: 390 LESYKLQLDELNKSNISLDSFLSEMDN 470
LE+ +L+ ++L++ ++ + + ++++
Sbjct: 120 LEALQLENNKLHEDSLEVKRTIGDLES 146
>SB_22332| Best HMM Match : bZIP_2 (HMM E-Value=0.99)
Length = 272
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
+P++ S+ + + +N + L DE LE + +++ +K L E IKAI H F
Sbjct: 127 DPNTSESSRQKARERNEERLSEIDE----LERENRELENQKPLKERIKAIFKKHGF 178
>SB_53685| Best HMM Match : bZIP_2 (HMM E-Value=0.99)
Length = 716
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
+P++ S+ + + +N + L DE LE + +++ +K L E IKAI H F
Sbjct: 571 DPNTSESSRQKARERNEERLSEIDE----LERENRELENQKPLKERIKAIFKKHGF 622
>SB_15367| Best HMM Match : DUF1212 (HMM E-Value=0.98)
Length = 286
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 156 LVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDE 335
L G+++T + +P++ S + + +N + L DE LE + +++ +K L E
Sbjct: 164 LQGVVAT--DRETINDPNTSESRRQEARERNEERLSEIDE----LERENRELENQKSLRE 217
Query: 336 AIKAILDPHAF 368
IKAI H F
Sbjct: 218 RIKAIFKKHGF 228
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 132 MIVARFICLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDI 311
M++ + LV +++ V + F + + + +N + S ++G++LEA +
Sbjct: 111 MVMMIMVVLVFMVTFLVMLVFMFDDVDSVVEQKEQISENVEDFGSSADTGNDLEASIQKA 170
Query: 312 KEK------KFLDEAIKAIL 353
KE+ KFL E +++L
Sbjct: 171 KERLDAWKAKFLKEEAESVL 190
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 246 FSVCSSRLLTYLTKDLFGTELTLP 175
F VC + L TYLTK L T++ +P
Sbjct: 2109 FRVCMTLLNTYLTKSLQNTDVKIP 2132
>SB_20418| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 670
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 246 FSVCSSRLLTYLTKDLFGTELTLP 175
F VC + L TYLTK L T++ +P
Sbjct: 69 FRVCMTLLNTYLTKSLQNTDVKIP 92
>SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
+P+S S+ + + +N + L DE LE + ++K +K L E IKAI + F
Sbjct: 177 DPNSSESSRQEARERNEERLPEIDE----LERENRELKNQKPLRERIKAIFKKYGF 228
>SB_35353| Best HMM Match : Arm (HMM E-Value=6.6e-27)
Length = 513
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 459 EMDNLSLEVCKTSQKALWSYVSDINNET 542
E NL LEV +++ ALWS + + N T
Sbjct: 138 EQKNLDLEVARSAALALWSCSTSMRNRT 165
>SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
+P+S S+ + + +N + L DE LE + ++K +K L E IKAI + F
Sbjct: 177 DPNSSESSRQEARERNEERLPEIDE----LERENRELKNQKPLRERIKAIFKKYGF 228
>SB_45095| Best HMM Match : DUF1168 (HMM E-Value=0.74)
Length = 604
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 417 ELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDI 530
EL + + SF+S NL +E+ T + WS++ DI
Sbjct: 195 ELVQMGQRMTSFISRPGNLPVELSTTCTQTEWSWLKDI 232
>SB_1253| Best HMM Match : TraD (HMM E-Value=1.5)
Length = 213
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
+P++ S + + +N K L DE LE++ +++ +K L E IKAI + F
Sbjct: 127 DPNTSESRRQEARERNEKRLSEIDE----LESENRELENRKPLRERIKAIFKKYGF 178
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 207 SSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDE 335
S + S +S+ ++ + D+S HE +AD DD EKK DE
Sbjct: 225 SGNESDSSSSSSSSSSSSSDDDDSDHEKDADDDD--EKKDKDE 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,202,004
Number of Sequences: 59808
Number of extensions: 404840
Number of successful extensions: 1724
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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