Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k21
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    30   0.019
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.41 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.2  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   5.0  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   5.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 30.3 bits (65), Expect = 0.019
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +3

Query: 180 VSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDD----IKEKKFLDEAIKA 347
           +  +  T  + D+  +     +N+K LD+      +L   +DD    + + K  DE + +
Sbjct: 304 IKTELSTGMNDDIPPETEEEEENDKKLDLDSIDMMQLPIQLDDGIDILDDVKCEDERVIS 363

Query: 348 ILDPHAFIPKNQDELE 395
           I D    +P N++ ++
Sbjct: 364 IPDKEITVPSNEETID 379


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 501 KALWSYVSDINNETKKNKMVRITAEEDEI--KKQYWNILKTKYLRDDTVKNDRNY 659
           K  WSYVS I  E+  N  ++   E +E+  K+     +K K ++D  V  D  Y
Sbjct: 277 KMKWSYVSIIYEES--NYGIKAFEELEELLGKRNICIAIKEKLVKDSGVAKDAAY 329


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 291 EADVDDIKEKKFLDEAIKAIL 353
           E   DDIKE ++LD+  K  L
Sbjct: 344 ELKYDDIKEMEYLDKVFKETL 364


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 504 LFGMFCILQDLNYPFRLRMNLNLY*ICLIHLI 409
           L G+FCI +   Y F+L  +  +   CL+ L+
Sbjct: 428 LIGLFCITEGGMYVFQLLDSYAVSGFCLLFLM 459


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 504 LFGMFCILQDLNYPFRLRMNLNLY*ICLIHLI 409
           L G+FCI +   Y F+L  +  +   CL+ L+
Sbjct: 481 LIGLFCITEGGMYVFQLLDSYAVSGFCLLFLM 512


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 438 SLDSFLSEMDNLSLEVCKTSQKALWSYVS 524
           S D + ++ DN+ ++V   +++ L +YV+
Sbjct: 20  SEDKYTTKYDNVDIDVVLNTERLLNAYVN 48


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 438 SLDSFLSEMDNLSLEVCKTSQKALWSYVS 524
           S D + ++ DN+ ++V   +++ L +YV+
Sbjct: 20  SEDKYTTKYDNVDIDVVLNTERLLNAYVN 48


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 161 WNNFNGSVSSVPNKSFVR 214
           +NNFN  + S+ N   V+
Sbjct: 531 YNNFNSDIKSISNNEQVK 548


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 161 WNNFNGSVSSVPNKSFVR 214
           +NNFN  + S+ N   V+
Sbjct: 531 YNNFNSDIKSISNNEQVK 548


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +3

Query: 171 STAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDES 278
           ST   V    NP SD+     S    N    VSD S
Sbjct: 317 STGNLVYIYNNPFSDVEERRVSKTAMNSNQIVSDNS 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,367
Number of Sequences: 438
Number of extensions: 3730
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)