Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k21
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06700.1 68418.m00757 expressed protein strong similarity to ... 34 0.11
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 34 0.11
At3g02930.1 68416.m00288 expressed protein ; expression support... 33 0.14
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 33 0.25
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 31 0.57
At5g41140.1 68418.m05001 expressed protein 31 0.76
At5g35610.1 68418.m04249 paired amphipathic helix repeat-contain... 31 0.76
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 31 1.0
At2g07320.1 68415.m00839 SWIM zinc finger family protein contain... 30 1.3
At3g17340.1 68416.m02216 importin-related contains Pfam profile ... 29 2.3
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 29 2.3
At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related... 29 2.3
At1g02730.1 68414.m00226 cellulose synthase family protein simil... 29 2.3
At4g32720.1 68417.m04657 RNA recognition motif (RRM)-containing ... 29 3.1
At2g25670.2 68415.m03077 expressed protein 29 3.1
At2g25670.1 68415.m03076 expressed protein 29 3.1
At4g02780.1 68417.m00378 copalyl diphosphate synthase / CPS / en... 29 4.0
At2g38910.1 68415.m04783 calcium-dependent protein kinase, putat... 29 4.0
At3g51040.2 68416.m05589 expressed protein contains Pfam PF05608... 28 5.3
At3g51040.1 68416.m05588 expressed protein contains Pfam PF05608... 28 5.3
At2g35030.1 68415.m04297 pentatricopeptide (PPR) repeat-containi... 28 5.3
At2g15390.2 68415.m01761 xyloglucan fucosyltransferase, putative... 28 5.3
At2g15390.1 68415.m01760 xyloglucan fucosyltransferase, putative... 28 5.3
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 5.3
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 28 5.3
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 28 7.1
At5g35170.1 68418.m04168 adenylate kinase family protein contain... 28 7.1
At5g19460.1 68418.m02319 MutT/nudix family protein similar to SP... 28 7.1
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 28 7.1
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 28 7.1
At5g41390.1 68418.m05029 hypothetical protein contains 1 predict... 27 9.3
At5g14240.1 68418.m01664 expressed protein 27 9.3
At3g15560.1 68416.m01972 expressed protein 27 9.3
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 27 9.3
At1g63830.2 68414.m07224 proline-rich family protein contains pr... 27 9.3
At1g63830.1 68414.m07223 proline-rich family protein contains pr... 27 9.3
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 27 9.3
>At5g06700.1 68418.m00757 expressed protein strong similarity to
unknown protein (emb|CAB82953.1)
Length = 608
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 180 VSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLD 332
VSV +TN SS+ S ++ K KT+D+ E+E + +K +F D
Sbjct: 209 VSVDLKTNSSSNSSTASSTPKKQTKTVDLVSSVKQEIEKWSESLKNCEFFD 259
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 282 HELEA-----DVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLD 446
HELE+ D + K +K ++E + + + + ++E ++D+L N L
Sbjct: 103 HELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEERNRLSEEIDQLKGENQMLH 162
Query: 447 SFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEEDEI 587
+SE+D+L +E+ S + ++ E K ++ E+D+I
Sbjct: 163 RRISELDSLHMEMKTKSAHEMEDASKKLDTEVSDQK--KLVKEQDDI 207
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 252 KTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKS 431
K L+VS+ H++E+++ D+KEK L E + + K++ +L + + + K
Sbjct: 341 KQLEVSNSRLHDMESEITDLKEKIELLE--MTVASQKVDLEKSEQKLGIAEEESSKSEKE 398
Query: 432 NISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEEDEIKKQYWNIL 611
L + L ++ + K Q A S + + K + + EE+E K+ L
Sbjct: 399 AEKLKNELETVNEEKTQALKKEQDATSSVQRLLEEKKKILSELESSKEEEEKSKKAMESL 458
Query: 612 ---------KTKYLRDDTV-KNDRNYQRKIRIIK 683
+++ L++ + + D+NY+ +I +K
Sbjct: 459 ASALHEVSSESRELKEKLLSRGDQNYETQIEDLK 492
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 32.7 bits (71), Expect = 0.25
Identities = 30/150 (20%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = +3
Query: 249 NKTLDVSDESGHELEADVDDIKEK-KFLDEAIKAILDPHAFIPKNQDELESYKLQLDELN 425
NK D +E +LEA + IKE+ K + K + + +++ LE + +++++
Sbjct: 433 NKKFDRVNEKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIR 492
Query: 426 KSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKKNKMVR--ITAEEDEIKKQY 599
+ + E + SLE+ K ++ S++ ++ +K+++ ++ E + +K++
Sbjct: 493 AEMTKKEEMIEE-ECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEK 551
Query: 600 WNILKTKYLRDDTVKNDRNYQRKIRIIKER 689
K + D+ K + +IRI +E+
Sbjct: 552 ERFEKEWEILDE--KQAVYNKERIRISEEK 579
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 177 AVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKF 326
A + Q QTNPSSD D +S+ +++ +++ ES H+LE + + K F
Sbjct: 64 AQTTQTQTNPSSD---DTSSSLSSSEPVELDFESHHKLELKITNQTVKYF 110
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 243 KNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDEL 422
K N+ +D E++ D++ +K E + A L I + +DE+E +L L+E
Sbjct: 693 KLNELSGKTDLKTKEMKRMSADLEYQKRQKEDVNADLTHE--ITRRKDEIEILRLDLEET 750
Query: 423 NKSNISLDSFLSE 461
KS++ ++ LSE
Sbjct: 751 RKSSMETEASLSE 763
Score = 28.3 bits (60), Expect = 5.3
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Frame = +3
Query: 294 ADVDDIKEKKFLDEAIKAILD---PHAF---IPKNQDELESYKLQLD--ELNKSNISLDS 449
++ DD +++K LDE +K +D H I +E+E YK + E+ +SLD
Sbjct: 450 SETDDDEDQKALDELVKGHMDAKEAHVLERRITDLYNEIEIYKRDKEDLEIQVEQLSLDY 509
Query: 450 FLSEMDN----LSLEVCKTSQKALWSYVSDINNETKKNKMVRITAEEDEIKKQYWNILKT 617
+ + +N LE + ++ Y + + + E ++KKQY ++
Sbjct: 510 EILKQENHDISYKLEQSQVQEQLKMQYECSSSLVNVNELENHVESLEAKLKKQYKECSES 569
Query: 618 KY 623
Y
Sbjct: 570 LY 571
>At5g35610.1 68418.m04249 paired amphipathic helix repeat-containing
protein weak similarity to SP|P22579 Paired amphipathic
helix protein {Saccharomyces cerevisiae}; contains Pfam
profile PF02671: Paired amphipathic helix repeat
Length = 155
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 216 MSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELE 395
+S T PK + D++G +++ + + KK++D LD F+ K +D+
Sbjct: 64 ISGFNTFLPKGFEIKPECDQNGFKIKLECEQTPPKKYVDIEYSEALD---FVRKVKDDDR 120
Query: 396 SYK---LQLDELNKSNISLDSFLSEM 464
YK +D K N SLD E+
Sbjct: 121 IYKSFVTIMDMYKKKNKSLDEVCREV 146
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 213 DMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDEL 392
D + DE T N + +VS+E L++ + I + LDE I +++ K+ + L
Sbjct: 324 DANCDEPVTGVNFIS-EVSEELSVHLQSGIMKIARRALLDEIISSVISDFLKAKKSDEHL 382
Query: 393 ESY 401
+SY
Sbjct: 383 KSY 385
>At2g07320.1 68415.m00839 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 534
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Frame = +3
Query: 276 SGHEL-EADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSF 452
+GH++ EA +D+IK A+K + + NQ+++ K+Q+ N+ LD
Sbjct: 279 AGHKVDEAMIDEIKRLARRTNALKQTMSQFIAVSINQEKVVFDKMQIKLDNEIVKRLDDK 338
Query: 453 LSE----MDNLSLEVCKTSQKALWSYVSDINNETKKNKMVR----ITAEEDEIKKQYWNI 608
L E M +S+ V K SY + + +K + R +T+ + Q+ N+
Sbjct: 339 LLESKASMKKMSIAVIWMDSK---SYRHEEIQKVRKGRFFRTKEQLTSADTRPTVQFNNL 395
Query: 609 LKTKYLRDDT 638
+ Y+ ++T
Sbjct: 396 TRFDYILEET 405
>At3g17340.1 68416.m02216 importin-related contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 822
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 153 CLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLD 332
C V ++ + ++ + N +D D+ + + +D + + E+D + E++FL+
Sbjct: 685 CFVSLMEASRRLK-EVNEETDDDEDDGEPGEEETESEETDSNDEDSESDECEETEEEFLE 743
Query: 333 EAIK--AILDPHAFIPKNQDELESYKLQLDELNK 428
K A L+ I + +E + +++ L LN+
Sbjct: 744 RYAKVAAELEDSEVIEEADEEDDDHEIDLGSLNE 777
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 285 ELEADVDDIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEM 464
EL + + ++E+ L +A + + A + QD+ E K QL E+N S DS + E+
Sbjct: 78 ELASQISQLQEE--LKKAKEQLSASEALKKEAQDQAEETKQQLMEINASE---DSRIDEL 132
Query: 465 DNLSLEVCKTSQKAL 509
LS E K Q L
Sbjct: 133 RKLSQERDKAWQSEL 147
>At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 352
Score = 29.5 bits (63), Expect = 2.3
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +3
Query: 201 NPSSDMSADETS-TPKNNKT-LD-VSD-ESGHELEADVDDIKEKKFLDEAIKAILDPHAF 368
N SSD D +S P KT LD VSD ESG + E D D EKK D+ + +D
Sbjct: 27 NSSSDDEDDVSSENPSPLKTTLDAVSDSESGSDEETDSDSELEKK-KDQVVTNPVDVKRA 85
Query: 369 IPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNETKK 548
E K L E++++ +S+D + +S E K ETKK
Sbjct: 86 KKVKTSEKSGAKRSL-EVDEAAVSMD--VKRAKKVSGEEEKKKS-------GGGGEETKK 135
Query: 549 NKMVRITAEEDEI 587
R+ E+DEI
Sbjct: 136 TYFQRLWTEDDEI 148
>At1g02730.1 68414.m00226 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-4 [gi:9622880]
from Zea mays
Length = 1181
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/105 (25%), Positives = 43/105 (40%)
Frame = +3
Query: 144 RFICLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKK 323
R + L I A + Q +P S + TS N+ + DE G V+D+ +
Sbjct: 26 RSLGLTSPIPRASVITNQNSPLSSRATRRTSISSGNRRSN-GDE-GRYCSMSVEDLTAET 83
Query: 324 FLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLS 458
E + + P +Q S + + DE+ K N + SFLS
Sbjct: 84 TNSECVLSYTVHIPPTPDHQTVFASQESEEDEMLKGNSNQKSFLS 128
>At4g32720.1 68417.m04657 RNA recognition motif (RRM)-containing
protein RNA-binding protein LAH1, Saccharomyces
cerevisiae, PIR2:B48600; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 433
Score = 29.1 bits (62), Expect = 3.1
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Frame = +3
Query: 189 QFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEA----DVDDIKEKKFLDEAIKAILD 356
Q + +D + +E+ T K T D E+ E++A D DD KE+K A+ D
Sbjct: 254 QKSSEEPTDKTMEESET-KPADTPDADKENTGEVQAEGAEDEDDEKEEK---GALATHKD 309
Query: 357 PHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYV-SDIN 533
+ + ++L++ + ++ + + S E L + + SQKA + V ++
Sbjct: 310 NKDVVLR--EDLKAVFGKFGDVKFVDFKMGS---ETGYLRFDEPEASQKARAAAVLANEG 364
Query: 534 NETKKNKMVRITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKIRIIKERGTN 698
KN + + E +K+YW +L++K D + R +R R ++RG++
Sbjct: 365 GLAVKNFIAVLEPVIGEAEKEYWTLLRSKDRFDKGGRGGRGGRRGGRFGRKRGSD 419
>At2g25670.2 68415.m03077 expressed protein
Length = 318
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 222 ADETSTPKNNKTLDVSDESGHELEADVDDIKEKK 323
AD PK N L+ S E+G E + DV+ EKK
Sbjct: 176 ADFGVAPKENNGLEESQEAGQEKKEDVNGEGEKK 209
>At2g25670.1 68415.m03076 expressed protein
Length = 318
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 222 ADETSTPKNNKTLDVSDESGHELEADVDDIKEKK 323
AD PK N L+ S E+G E + DV+ EKK
Sbjct: 176 ADFGVAPKENNGLEESQEAGQEKKEDVNGEGEKK 209
>At4g02780.1 68417.m00378 copalyl diphosphate synthase / CPS /
ent-kaurene synthetase A (GA1) identical to GI:571330
[PMID: 7994182]; formerly called ent-kaurene synthetase
A
Length = 802
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 255 FYYFSVCSSRLLTYLTKDLF 196
FYYF++C L T+++K LF
Sbjct: 780 FYYFALCGDHLQTHISKVLF 799
>At2g38910.1 68415.m04783 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase, isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 583
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 168 ISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGH 284
+S AV + + S S DE+S KN+K+++ D +GH
Sbjct: 19 VSAAVWRNQKPDDSIKSSKDESSRKKNDKSVNGDDSNGH 57
>At3g51040.2 68416.m05589 expressed protein contains Pfam PF05608:
Protein of unknown function (DUF778)
Length = 231
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 147 FICLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEK 320
F+C+ AVS Q N + S +S N + +E HE E DD K
Sbjct: 68 FVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKEPTWDDALRK 125
>At3g51040.1 68416.m05588 expressed protein contains Pfam PF05608:
Protein of unknown function (DUF778)
Length = 231
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 147 FICLVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEK 320
F+C+ AVS Q N + S +S N + +E HE E DD K
Sbjct: 68 FVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKEPTWDDALRK 125
>At2g35030.1 68415.m04297 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 627
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 501 KALWSYVSDINNETKKNKMVRITAEEDE 584
+AL S +SD+ N+ +KNK V AEE E
Sbjct: 596 EALDSILSDLRNKMRKNKNVTSDAEEAE 623
>At2g15390.2 68415.m01761 xyloglucan fucosyltransferase, putative
(FUT4) identical to SP|Q9SJP2 Probable
fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 500
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 588 KKQYWNILKTKYLRDDTVKNDRNYQRKIRIIKERG 692
K Q W+I+ TKY D K D +IR+ +++G
Sbjct: 277 KNQVWDIV-TKYYHDHLSKADERLGIQIRVFRDQG 310
>At2g15390.1 68415.m01760 xyloglucan fucosyltransferase, putative
(FUT4) identical to SP|Q9SJP2 Probable
fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 503
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 588 KKQYWNILKTKYLRDDTVKNDRNYQRKIRIIKERG 692
K Q W+I+ TKY D K D +IR+ +++G
Sbjct: 280 KNQVWDIV-TKYYHDHLSKADERLGIQIRVFRDQG 313
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 393 ESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTSQKALWSYVSDINNET--KKNKMVRI 566
E K+Q D LNK N L + E+++L + +K +S+ N K+N++ +
Sbjct: 925 ELSKVQEDLLNKEN-ELHGMVVEIEDLRSKDSLAQKKI--EELSNFNASLLIKENELQAV 981
Query: 567 TAEEDEIKKQYWNILKT 617
E +E+K + + LKT
Sbjct: 982 VCENEELKSKQVSTLKT 998
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +3
Query: 384 DELESYKLQLDELNKSNISLDSFLS---EMDNLSLEVCKTSQ-KAL-WSYVSDINNETKK 548
DE+ S K +L+++ K + ++ F S E++ E+ S K++ S + + KK
Sbjct: 180 DEVVSVKKELNQMGKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIEREELQNKK 239
Query: 549 NKMVRITAEEDEIKKQYWN 605
NK++ + E D+ QY++
Sbjct: 240 NKLLTMVDEVDKRYNQYYH 258
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 198 TNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDE 335
TN D E PK K D E +V+D +E+K L+E
Sbjct: 102 TNDEEDEVIAEEEEPKKKKKKQRKDTEAKSEEEEVEDKEEEKKLEE 147
>At5g35170.1 68418.m04168 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 588
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/93 (19%), Positives = 41/93 (44%)
Frame = +3
Query: 306 DIKEKKFLDEAIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEV 485
D+ ++ +D + LDP + +++Y + DE+ ++ E L++
Sbjct: 190 DVPDEILIDRCVGRRLDP---VTGKIYHIKNYPPESDEIKARLVTRPDDTEEKVKARLQI 246
Query: 486 CKTSQKALWSYVSDINNETKKNKMVRITAEEDE 584
K + +A+ S SD+ + N+ + EE +
Sbjct: 247 YKQNSEAIISAYSDVMVKIDANRPKEVVFEETQ 279
>At5g19460.1 68418.m02319 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 374
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
Frame = +3
Query: 357 PHAFIPKNQD-ELESYKL 407
P F+PKNQD E+ES+KL
Sbjct: 303 PEDFVPKNQDGEVESFKL 320
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 162 GIISTAVSVQFQTNPSSDMSADETSTPKNNKTLD 263
GI+ +V + NP SD AD+T PKNN D
Sbjct: 704 GIVEGSVGTE-DPNPGSD-EADKTDIPKNNDESD 735
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 162 GIISTAVSVQFQTNPSSDMSADETSTPKNNKTLD 263
GI+ +V + NP SD AD+T PKNN D
Sbjct: 780 GIVEGSVGTE-DPNPGSD-EADKTDIPKNNDESD 811
>At5g41390.1 68418.m05029 hypothetical protein contains 1 predicted
transmembrane domain;
Length = 297
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 695 SSTFFYNSNFTLVITIILNCVIS*IFCLQNIPVLF 591
S+ F F + T NC+I +FCL I +F
Sbjct: 99 STRFMLQDEFNIHTTKCDNCIIGFMFCLNQIACIF 133
>At5g14240.1 68418.m01664 expressed protein
Length = 256
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 204 PSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDE 335
P+ + DE+S PK+ D E E D D+ + +FL+E
Sbjct: 38 PAYTPAEDESSAPKDQAWFDKKTEEELEDLEDDKDLDDDRFLEE 81
>At3g15560.1 68416.m01972 expressed protein
Length = 471
Score = 27.5 bits (58), Expect = 9.3
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 201 NPSSDMSADETSTPKNNKTLDVSDESGHELEA-DVDDIKEKKFLDEAIKAILDPHAFIPK 377
N + S E K L + E+ + + D+ K KK +DE I+ + F+ K
Sbjct: 277 NEEDEESRRERGKGNVEKWLHILLENNSKSDPHDLQTEKSKK-IDEMIEKLDHKFPFLEK 335
Query: 378 NQDELESYKLQLDELNKSNISLDSFLSEMDNLSLEVCKTS 497
+E KLQ E N + +D E+D L L+ +T+
Sbjct: 336 VDEEEVDLKLQAKEANNNTSKVDE--EEVD-LQLQAKETN 372
>At2g27170.1 68415.m06029 structural maintenance of chromosomes (SMC)
family protein similar to basement membrane-associated
chondroitin proteoglycan Bamacan [Rattus norvegicus]
GI:1785540; contains Pfam profile PF02463: RecF/RecN/SMC
N terminal domain. No suitalble start codon was
identified.
Length = 1207
Score = 27.5 bits (58), Expect = 9.3
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 3/175 (1%)
Frame = +3
Query: 156 LVGIISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDE 335
L+G I T + Q S M E T + E +L ++ D+KEKKF +
Sbjct: 752 LLGDIRTRID---QVRSSMSMKEAEMGTELVDHLTPEEREQLSKLNPEIKDLKEKKFAYQ 808
Query: 336 AIKAILDPHAFIPKNQDELESYKLQLDELNKSNISLDSFLSEMDNLSL-EVCKTSQKALW 512
A + I + + E L + L + ++ +D+ SL T ++ L
Sbjct: 809 ADR--------IERETRKAELEANIATNLKRRITELQATIASIDDDSLPSSAGTKEQELD 860
Query: 513 SYVSDINNETKKNKMV--RITAEEDEIKKQYWNILKTKYLRDDTVKNDRNYQRKI 671
+N K+ K V I + +IKK K K L DD ++ +K+
Sbjct: 861 DAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDEKAKLKTLEDDCKGTLQDLDKKL 915
>At1g63830.2 68414.m07224 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains 1 predicted transmembrane domain
Length = 232
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 695 SSTFFYNSNFTLVITIILNCVIS*IFCLQNIPVLF 591
S+ F F + T NC+I +FCL + +F
Sbjct: 99 STRFLLQDEFNIQTTQCDNCIIGFMFCLSQVACIF 133
>At1g63830.1 68414.m07223 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains 1 predicted transmembrane domain
Length = 232
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 695 SSTFFYNSNFTLVITIILNCVIS*IFCLQNIPVLF 591
S+ F F + T NC+I +FCL + +F
Sbjct: 99 STRFLLQDEFNIQTTQCDNCIIGFMFCLSQVACIF 133
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 165 IISTAVSVQFQTNPSSDMSADETSTPKNNKTLDVSDESGHELEADVDDIKEKKFLDEAIK 344
II +V + NP SD AD+T PKNN D SD + +EA + K + + +
Sbjct: 811 IIEGSVETE-DPNPGSD-EADKTDIPKNN---DESDNAA-AVEAKEEKKSSPKKVKKQLV 864
Query: 345 AILD---PHAFIPK 377
LD PH F K
Sbjct: 865 YELDDAHPHGFKAK 878
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,352,280
Number of Sequences: 28952
Number of extensions: 289007
Number of successful extensions: 1132
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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