Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k20
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    27   0.20 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    27   0.20 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.35 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.35 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
 Frame = -3

Query: 680 ILEMESLCAKTKSDLSDRPPEVFFLS--VPSFD--SLFSVFAVTMTSFGMISLVRASLLF 513
           ++ + +L    K +L     + F+ S  + S+   S++S+F +       + ++   L+F
Sbjct: 34  LIGLNTLRIGRKGELKQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNSL-VINKRLIF 92

Query: 512 KGAKTWVSFWILVTACTFGISATTTFSLIPLKHEAIKFFKS 390
                 ++  ++VT  TF    T   S   L H  + F K+
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKA 133


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
 Frame = -3

Query: 680 ILEMESLCAKTKSDLSDRPPEVFFLS--VPSFD--SLFSVFAVTMTSFGMISLVRASLLF 513
           ++ + +L    K +L     + F+ S  + S+   S++S+F +       + ++   L+F
Sbjct: 34  LIGLNTLRIGRKGELKQHKSDYFYFSFYITSYTLLSVYSLFRIATNENNSL-VINKRLIF 92

Query: 512 KGAKTWVSFWILVTACTFGISATTTFSLIPLKHEAIKFFKS 390
                 ++  ++VT  TF    T   S   L H  + F K+
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKA 133


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query: 562 VTAKTENKLSKLGTDKKKTSG---GLSERSDLVLAQRDSISSIG 684
           V AKT+N       DK+K+ G   GL E    +   R  ISS+G
Sbjct: 317 VRAKTQNATPANNNDKRKSRGEVDGLGENMMDMSLTRHQISSMG 360



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 478 RIQNDTQVLAPLNNNDAR 531
           +++  TQ   P NNND R
Sbjct: 316 KVRAKTQNATPANNNDKR 333


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query: 562 VTAKTENKLSKLGTDKKKTSG---GLSERSDLVLAQRDSISSIG 684
           V AKT+N       DK+K+ G   GL E    +   R  ISS+G
Sbjct: 317 VRAKTQNATPANNNDKRKSRGEVDGLGENMMDMSLTRHQISSMG 360



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 478 RIQNDTQVLAPLNNNDAR 531
           +++  TQ   P NNND R
Sbjct: 316 KVRAKTQNATPANNNDKR 333


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 511 LNNNDARTNEIIPNEVIVTAKTENKLS 591
           LN  DAR NEI P+ + V ++ +N LS
Sbjct: 453 LNPLDARCNEIRPDAICV-SQLKNALS 478


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 629 YRKDLIWFWHKETPFRVLVQTFAEFV 706
           YR D   F+ K +P R++VQT  +F+
Sbjct: 51  YRTD---FYKKLSPMRLIVQTCLDFL 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,495
Number of Sequences: 336
Number of extensions: 3497
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)