Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k16
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.33 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.33 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.33 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.43 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.0  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 179 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 78
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 37  FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 70


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 179 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 78
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 270 FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 179 FFQALGFQKVAISQRNIFVYKFLAVIHIITYI*T 78
           F +ALG  K     R  F+Y F+A +  + +  T
Sbjct: 270 FIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCT 303


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 591 NSSLNDNQEILILSEASMSLSGVFSSPT 674
           N   +DNQ+ L   E S+  SG+FSS T
Sbjct: 137 NRKPDDNQDHLRRLEMSLEKSGLFSSKT 164


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 591 FLLFHFY*TFRWSKIRFLA 535
           F+LFH Y  F W++I  +A
Sbjct: 121 FVLFHTYEAFVWTRIMGVA 139


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +2

Query: 11  ICQKCNIVSSIDLCNLVLILHLKFK 85
           IC  C + +   +CN++ +  +++K
Sbjct: 113 ICHICELHTIFLVCNVLTVFKIRYK 137



 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 93  NNMNDSQKFIDKDISLRNS 149
           +++N + +FIDK ++ RNS
Sbjct: 47  SSLNKNFQFIDKKLNNRNS 65


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
 Frame = -2

Query: 543 FLATILWLAF-PA---YQRNFHNYYRLSYF 466
           F A   W+   PA   ++  F NYY + YF
Sbjct: 308 FRALTFWIIVAPAGSNFEIGFENYYNILYF 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,412
Number of Sequences: 336
Number of extensions: 3220
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)