Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k16
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54077| Best HMM Match : SRF-TF (HMM E-Value=4.4) 33 0.21
SB_4809| Best HMM Match : SRF-TF (HMM E-Value=5.5) 33 0.21
SB_58759| Best HMM Match : MTS (HMM E-Value=4.5) 32 0.49
SB_18246| Best HMM Match : SRF-TF (HMM E-Value=3.3) 32 0.49
SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46) 30 1.5
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2828| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_28591| Best HMM Match : PAN (HMM E-Value=0.0019) 29 3.5
SB_38341| Best HMM Match : TFIID_90kDa (HMM E-Value=4.6e-19) 29 3.5
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 8.0
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_54077| Best HMM Match : SRF-TF (HMM E-Value=4.4)
Length = 344
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLTVTYSSENTWEIDF 413
K +T+ ++DL+ + +LL KH D++ Q I ER+LL T S + E+
Sbjct: 241 KKLLTKHSRDLLEVQVIFTEENKLLTKHSRDMLEVQVIFTKERKLL--TKHSHDLLEVHV 298
Query: 414 C 416
C
Sbjct: 299 C 299
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL++ + +LL KH DL+ Q I ER+LLT
Sbjct: 76 LTKHSHDLVMVQVIFTQERKLLMKHSHDLLEVQVIFTKERKLLT 119
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
K +T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 31 KKLLTKHSHDLVKVQVIFTKKRKLLTKHSRDLLEVQVIFTKERKLLT 77
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
K +T+ ++DL+ + +LL KH DL+ Q I E +LLT
Sbjct: 178 KKLLTKHSRDLLEVQVIFTEENKLLTKHSRDLLEVQVIFTEENKLLT 224
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 118 LTKHSHDLLEVQVIFTKERKLLTKHSRDLLEVQVIFTKERKLLT 161
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH D++ Q I E++LLT
Sbjct: 202 LTKHSRDLLEVQVIFTEENKLLTKHSRDMLEVQVIFTREKKLLT 245
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH DL+ Q I E++LLT
Sbjct: 139 LTKHSRDLLEVQVIFTKERKLLTKHSHDLLEVQVIFTREKKLLT 182
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 153 LLESQSL-EEDTDLKTKYKTFLW-----FLNYGKIFVTRLTKDLIISLASYVYSGQLLPK 314
LLE Q + E+ L TK+ L F K+ +T+ ++D++ + +LL K
Sbjct: 188 LLEVQVIFTEENKLLTKHSRDLLEVQVIFTEENKL-LTKHSRDMLEVQVIFTREKKLLTK 246
Query: 315 HITDLMHTQKILQAERELLT 374
H DL+ Q I E +LLT
Sbjct: 247 HSRDLLEVQVIFTEENKLLT 266
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I E +LLT
Sbjct: 160 LTKHSHDLLEVQVIFTREKKLLTKHSRDLLEVQVIFTEENKLLT 203
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELL 371
+T+ ++DL+ + +LL KH DL+ Q I ER+LL
Sbjct: 55 LTKHSRDLLEVQVIFTKERKLLTKHSHDLVMVQVIFTQERKLL 97
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 261 DLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 103 DLLEVQVIFTKERKLLTKHSHDLLEVQVIFTKERKLLT 140
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I +R+LLT
Sbjct: 13 LTKHSHDLLEVQVIFTKEKKLLTKHSHDLVKVQVIFTKKRKLLT 56
>SB_4809| Best HMM Match : SRF-TF (HMM E-Value=5.5)
Length = 311
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLTVTYSSENTWEIDF 413
K +T+ ++DL+ + +LL KH D++ Q I ER+LL T S + E+
Sbjct: 244 KKLLTKHSRDLLEVQVIFTEENKLLTKHSRDMLEVQVIFTKERKLL--TKHSHDLLEVHV 301
Query: 414 C 416
C
Sbjct: 302 C 302
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
K +T+ ++DL+ + +LL KH DL+ Q I E +LLT
Sbjct: 181 KKLLTKHSRDLLEVQVIFTEENKLLTKHSRDLLEVQVIFTEENKLLT 227
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 121 LTKHSHDLVKVQVIFTKKRKLLTKHSRDLLEVQVIFTKERKLLT 164
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH D++ Q I E++LLT
Sbjct: 205 LTKHSRDLLEVQVIFTEENKLLTKHSRDMLEVQVIFTREKKLLT 248
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH DL+ Q I E++LLT
Sbjct: 142 LTKHSRDLLEVQVIFTKERKLLTKHSHDLLEVQVIFTREKKLLT 185
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 153 LLESQSL-EEDTDLKTKYKTFLW-----FLNYGKIFVTRLTKDLIISLASYVYSGQLLPK 314
LLE Q + E+ L TK+ L F K+ +T+ ++D++ + +LL K
Sbjct: 191 LLEVQVIFTEENKLLTKHSRDLLEVQVIFTEENKL-LTKHSRDMLEVQVIFTREKKLLTK 249
Query: 315 HITDLMHTQKILQAERELLT 374
H DL+ Q I E +LLT
Sbjct: 250 HSRDLLEVQVIFTEENKLLT 269
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I E +LLT
Sbjct: 163 LTKHSHDLLEVQVIFTREKKLLTKHSRDLLEVQVIFTEENKLLT 206
>SB_58759| Best HMM Match : MTS (HMM E-Value=4.5)
Length = 147
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 84 NVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTDLKTKYKTFLWFLNYGKIFVTRLTKD 263
+++N ++ ++ + +S++ S ++ + T LKT+ TF+ L GK ++ +
Sbjct: 19 SLTNLKSNKERKAESPLSIKRSKY-HTRERNQQTQLKTQIDTFILILQPGKAKQEKIIMN 77
Query: 264 LIISLASYVYSGQLLPKHITD-LMHTQKILQA 356
+ + S QL PK + D L H+ +L A
Sbjct: 78 PPLLANIHKQSTQLCPKRLHDVLRHSPNMLIA 109
>SB_18246| Best HMM Match : SRF-TF (HMM E-Value=3.3)
Length = 598
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 261 LTKHSRDLLEVQVIFTQERKLLTKHSHDLLEVQVIFTKERKLLT 304
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLTVTY 383
+T+ ++DL+ + +LL KH DL+ Q I ER+LLT ++
Sbjct: 31 LTKHSRDLLEVQVIFTQERKLLTKHSHDLVKVQVIFTQERKLLTSSH 77
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 234 KIFVTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
K +T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 153 KKLLTKHSHDLLEVQVIFTQERKLLTKHSHDLLEVQVIFTQERKLLT 199
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 345 LTKHSRDLLEVQVIFTKERKLLTKHSHDLLEVQVIFTKERKLLT 388
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++DL+ + +LL KH D++ Q I ER+LLT
Sbjct: 492 LTKHSRDLVEVQVIFTKERKLLTKHSRDMLEVQVIFTKERKLLT 535
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 10 LTKHSHDLVKVQVIFTKKRKLLTKHSRDLLEVQVIFTQERKLLT 53
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLTVTYSSENTWEIDFC 416
+T+ + DL+ + +LL KH DL+ Q I ER+LL T S + E+ C
Sbjct: 534 LTKHSHDLLEVQVIFTQKRKLLTKHSHDLLEVQVIFTQERKLL--TEHSHDLLEVHVC 589
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 135 LTKHSHDLVEVRVIFTKEKKLLTKHSHDLLEVQVIFTQERKLLT 178
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 177 LTKHSHDLLEVQVIFTQERKLLTKHSHDLLEVQVIFTKERKLLT 220
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 219 LTKHSHDLLEVQVIFTQERKLLTKHSHDLLEVQVIFTKERKLLT 262
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 240 LTKHSHDLLEVQVIFTKERKLLTKHSRDLLEVQVIFTQERKLLT 283
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 303 LTKHSHDLLEVQVIFTQERKLLTKHSHDLLEVQVIFTKERKLLT 346
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 324 LTKHSHDLLEVQVIFTKERKLLTKHSRDLLEVQVIFTKERKLLT 367
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++D++ + +LL KH DL+ Q I ER+LLT
Sbjct: 471 LTKHSRDMLEVQVIFTKERKLLTKHSRDLVEVQVIFTKERKLLT 514
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 198 LTKHSHDLLEVQVIFTKERKLLTKHSHDLLEVQVIFTQERKLLT 241
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 282 LTKHSHDLLEVQVIFTKERKLLTKHSHDLLEVQVIFTQERKLLT 325
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 93 LTKHSHDLLEVQVIFTQERKLLTKHSHDLVKVQVIFTKERKLLT 136
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH D++ Q I ER+LLT
Sbjct: 450 LTKHSHDLLEVQVIFTKKRKLLTKHSRDMLEVQVIFTKERKLLT 493
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 366 LTKHSHDLLEVQVIFTKERKLLTKHSHDLVKVQVIFTQERKLLT 409
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++D++ + +LL KH DL+ Q I +R+LLT
Sbjct: 429 LTKHSRDMLEVQVIFTKKRKLLTKHSHDLLEVQVIFTKKRKLLT 472
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ ++D++ + +LL KH DL+ Q I +R+LLT
Sbjct: 513 LTKHSRDMLEVQVIFTKERKLLTKHSHDLLEVQVIFTQKRKLLT 556
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 261 DLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
DL+ + +LL KH DL+ Q I ER+LLT
Sbjct: 78 DLLEVQVIFTKKRELLTKHSHDLLEVQVIFTQERKLLT 115
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH DL+ Q I E +LLT
Sbjct: 387 LTKHSHDLVKVQVIFTQERKLLTKHSHDLLEVQVIFTKEMKLLT 430
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 243 VTRLTKDLIISLASYVYSGQLLPKHITDLMHTQKILQAERELLT 374
+T+ + DL+ + +LL KH D++ Q I +R+LLT
Sbjct: 408 LTKHSHDLLEVQVIFTKEMKLLTKHSRDMLEVQVIFTKKRKLLT 451
>SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46)
Length = 986
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +3
Query: 426 NIIHSPKFIPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSS 599
N ++S + V +N D NY +K EK I S+ ++E ++N++ N + + +S+
Sbjct: 38 NTVYSSDGMKVSDQNANSDQNYHQKFNKTEK--INSTTKSENASNDISNSSNVDMSSA 93
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 483 NNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEI 620
NN+ N + + +S+ N + N + N+N NS N+N I
Sbjct: 1738 NNHNNNNNSINNCNNNNSINNRNNNNSINNRNNTNNNSINNNNSSI 1783
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 456 VDSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILS 632
+++ N I+NN + ++ + SS+ N S+ N + NSS+N+N +I +
Sbjct: 1783 INNNNSSINNNNSSIINNNSSINNNNSSINNNNSSIINNNSSNNNNNSSINNNNSSIINN 1842
Query: 633 EASM 644
+S+
Sbjct: 1843 NSSI 1846
>SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 84 NVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTDLKTKYKTFLWFLNYGK 236
N +NN N+ + +D++ + R+ E Q ++ED +++ W +N GK
Sbjct: 183 NNNNNNNNDAEEVDREAATRSPSPNEQQVIQEDNKRQSR---LAWIINSGK 230
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQ 614
D KN D+N N +K +S N N+ N N I EN S+N++Q
Sbjct: 169 DDKNNSKDDNNNNNGNKNSNNNSDSDYNNNKDNNDDENSNSIDEN-SINNSQ 219
>SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQE 617
D+ N +N+ N ++ + ++ +N S NE N N EN + N N E
Sbjct: 39 DNNNSDNENDNNNSYNENDNSNSDNENDNNNSNNENDNNNSNNENDNNNSNNE 91
>SB_2828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 483 NNYENFVDKLEKLTIESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSG 656
NNY++ + +K ES N + +K+E+K ++N+ Q L L + + SG
Sbjct: 163 NNYQHALSLFQKTGDESDQANAYLGMGEVHKSEVKYEDAMNNYQHALSLFQKTGDESG 220
>SB_28591| Best HMM Match : PAN (HMM E-Value=0.0019)
Length = 238
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 156 EGSYFATKYLCL*ISGCHSYYYLHLNLRCKINTKLHKSIEETML 25
EG F Y C C S+ YL+ + C++N + ++ E+ ++
Sbjct: 15 EGDLFECFYACQREQPCQSFNYLYTSAICELNNRTMEAREQHVI 58
>SB_38341| Best HMM Match : TFIID_90kDa (HMM E-Value=4.6e-19)
Length = 426
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 72 ILSLNVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTDLKTKYKTFLWFLNYGKIFVTR 251
ILSL+V N DS F D+ S++L+ K L F + ++
Sbjct: 62 ILSLSV--NHLDSSTF-DEQFGNLKSFILDVNPAYRSELAK------LLFPMFAVCYLEL 112
Query: 252 LTKDLIISLASYV--YSGQLLPKHITDLMHTQKILQAER 362
+ K +IS ++ YSG L +H D+ H Q I +ER
Sbjct: 113 IAKGHLISAQNFFSKYSGDLALEHKEDIQHLQAITDSER 151
>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 3 VSVYVRNVTLFPQLICAIWY*FYILSL 83
VS+YV N+ LFPQLI ++ F ++ +
Sbjct: 359 VSIYVYNILLFPQLIHLGFWWFVVIDI 385
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +3
Query: 423 ENIIHSPKFIPVDSKNMIIDNNYEN---FVDKLEKLTIESSLEN---EFSTNEMFNKNEI 584
+NII + I +++ N+II+NN N ++ + I +++ N + N + N I
Sbjct: 389 QNIIINNNNIIINNNNIIINNNINNNNIIINNNNIIIINNNIININIIINNNNIIINNII 448
Query: 585 KENSSLNDNQEILILSEAS 641
+N +N+N I+ +S ++
Sbjct: 449 IKNIIINNNNIIIKISSST 467
>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4248
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 250 RVTNILP*FRNQRNVLYFVFKSVSSSKLWDSRR*LFRNE 134
R+ ++P F +V Y + + SS K WD ++ ++R +
Sbjct: 3433 RLVTVMPVFDESHDVRYTIDRFQSSCKYWDIKKEVWRTD 3471
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIESSL-ENEFSTNEMFNKNEIKENSSLNDNQ 614
D KN D+N N +K K +S N+ + N+ N N I EN S+N++Q
Sbjct: 51 DDKNNSKDDNNNNNGNKNSKNNSDSDYNNNKDNNNDDENSNSIDEN-SINNSQ 102
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,693,407
Number of Sequences: 59808
Number of extensions: 325941
Number of successful extensions: 1034
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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