Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k16
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.72 

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +3

Query: 423  ENIIHSPKFIPVDSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSS 599
            E +I    F+P  ++   ID  YEN   KL  L     S  + F+    +NKN   E  S
Sbjct: 2051 EQVIKKVFFVPTINRTYSIDYEYEN--GKLHSLRYPMDSAASSFTLIYDYNKN--GEVKS 2106

Query: 600  LNDNQEILILSEASMSLSGVFSSPTI 677
            + ++ + + + E S +  G+  +  +
Sbjct: 2107 IKESTKRVPMFEFSYNADGMVETMNV 2132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,579
Number of Sequences: 2352
Number of extensions: 11544
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)