Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k16
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched relat... 33 0.14
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 32 0.33
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 32 0.33
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 32 0.33
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal prote... 29 2.3
U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal prote... 29 2.3
L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein. 29 2.3
L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein. 29 2.3
L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein. 29 2.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 5.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 5.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 5.3
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AC024847-6|AAF60855.1| 909|Caenorhabditis elegans Patched related
family protein 21 protein.
Length = 909
Score = 33.5 bits (73), Expect = 0.14
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 153 LLESQSLEEDTDLKTKYKTFLWFLNYGKIFVTRLTKDLIISLASYVYSGQLL--PKHITD 326
LL S+ + E + L+ + L F Y KI +R T L+I + S VY G + I
Sbjct: 452 LLLSERVNEPSKLEGTFNKVLGF--YAKIICSRWTFALLI-IGSLVYWGFGIYGTLGIRA 508
Query: 327 LMHTQKILQAERELLTVTYSSENTWEIDFCPWENIIHSPKFIPVDSKNMIIDNNYENFVD 506
+++T KIL E + E T +F P I++SP I + DN +F +
Sbjct: 509 VLNTAKILPLETPIRKPNRIIEETVWKEFYPVTVIVNSPVDISNANALRAFDNLVHDF-E 567
Query: 507 KLEK 518
+EK
Sbjct: 568 SMEK 571
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 635
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 636 AS 641
AS
Sbjct: 1333 AS 1334
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 635
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 636 AS 641
AS
Sbjct: 1333 AS 1334
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 459 DSKNMIIDNNYENFVDKLEKLTIE-SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSE 635
D K + +N ++ + KL K+ E S++ S +E N N +K+N+SL + ++ L+E
Sbjct: 1275 DHKMREMQSNLDDLMAKLSKMNNELESIQKAKSADETLNSNLLKKNASL--DMQLSELTE 1332
Query: 636 AS 641
AS
Sbjct: 1333 AS 1334
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 24 VTLFPQLICAIWY*FYILSLNVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTD 188
+ LFP I + + I++L + NN N + + + N LLE+ SL ED D
Sbjct: 325 LALFP--IITLTSSYPIIALTLINNFNVVKDILCPKVGQENESLLEADSLVEDND 377
>U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal protein
1, isoform b protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 402 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 563
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 564 MFNK 575
FNK
Sbjct: 202 HFNK 205
>U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal protein
1, isoform c protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 402 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 563
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 564 MFNK 575
FNK
Sbjct: 202 HFNK 205
>L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 402 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 563
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 564 MFNK 575
FNK
Sbjct: 202 HFNK 205
>L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 402 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 563
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 564 MFNK 575
FNK
Sbjct: 202 HFNK 205
>L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 402 EIDFCPWE---NIIHS--PKF-IPVDSKNMIIDNNYENFVDKLEKLTIESSLENEFSTNE 563
E D C E +I++S KF + + KN +ID +++ + + SLEN T E
Sbjct: 142 ETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIAEDGSLENSNGTTE 201
Query: 564 MFNK 575
FNK
Sbjct: 202 HFNK 205
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 480 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 608
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 480 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 608
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 480 DNNYENFVDKLEKLTIESSLENEFSTNEMFNKNEI-KENSSLND 608
D N E+ +LEKL ESSL N ++N + E+ KE L D
Sbjct: 2076 DANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTD 2119
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -1
Query: 220 NQRNVLYFVFKSVSSSKLWDSRR*LFRNEI--SLSINFWLSFILLLTFKLK 74
++ N+L V++ +S W+SR +F I LS+ ++ F +L+ KL+
Sbjct: 177 HEMNILIAVYEDLSPKVTWNSRLGVFLVSIISILSVLIYILFSILIVSKLR 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,975,612
Number of Sequences: 27780
Number of extensions: 276120
Number of successful extensions: 902
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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