Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k13
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 0.43
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 29 0.75
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 28 1.00
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.7
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 3.0
SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr 2|... 26 5.3
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 26 5.3
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 26 5.3
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 25 7.0
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 25 7.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 7.0
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces... 25 9.3
SPBP23A10.03c |||ACN9 family mitochondrial protein|Schizosacchar... 25 9.3
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 9.3
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.5 bits (63), Expect = 0.43
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRER-NEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQ 393
I+ E++N K LEE + E+ +E +LD K+ + Y KSN + ++Q
Sbjct: 631 IQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEEMQ 690
Query: 394 FSR 402
R
Sbjct: 691 VLR 693
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 28.7 bits (61), Expect = 0.75
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 502 FVLIPKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNI 636
F+ + + S V +M E P DN+ K+++EIL QLKN+
Sbjct: 201 FITLDSLLSDVNRMIVTEQARFIKNPYDNMA-KKRFEILLQLKNV 244
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 28.3 bits (60), Expect = 1.00
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 336 AISYFIQSVQYEFITLPSFLIFFKKSVILFSECVNSFRFYYCNPFESK 193
++ ++ Q+ +F LP FF+K V LFS + Y FESK
Sbjct: 775 SLIFYYQATTLQFYNLPKVRPFFEKGVTLFSANTAIWEVYIF--FESK 820
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 177 RKFKYFYSRRDYNNKIGTN*RTQKTI 254
+K K+FY R D K GTN R +T+
Sbjct: 1195 KKHKHFYHRDDGKYKSGTNLRKSETV 1220
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 373 NLRSQIQFSRNQDIQARSTNEILAYLNSF 459
+L S I F+ + + R+ NEIL Y+N+F
Sbjct: 1119 SLNSAIGFNISVLVFVRANNEILTYINNF 1147
>SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 35 VYLRYCLSLFFRVKNIYYYSLK 100
VY+ L+LF+R K++YY+ ++
Sbjct: 43 VYVTRYLNLFWRYKSLYYFLMR 64
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 205 GITIIKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRY 333
G + SER+ ++RK LE+D K + + I D++ Y
Sbjct: 347 GEVVGMSERLKSMRKALRNILEKDLKNKHSWKHITDQIGMFCY 389
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 433 EILAYLNSFSGIDDTTIQEICKKFVLIPKVPSSVPKMNFI 552
EILA L S SGI++ ++ + + L + S+VP+ F+
Sbjct: 115 EILAILISLSGIENGLVRNLSE--FLSTSILSAVPRQKFL 152
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 454 SFSGIDDTTIQEICKKFVLIPKVPSSVPKMNFIENRYK 567
SFSGI I C + +PS K + + Y+
Sbjct: 432 SFSGISPAIISPSCSSHAFVKAIPSISSKFSQLAEEYE 469
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 520 VPSSVPKMNFIENRYKDSEPNDNV 591
VP VP++ IE+RYK+ P +N+
Sbjct: 49 VPDDVPEVPHIESRYKNL-PGNNI 71
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 354 SQVERFQSSLTNSIFKKPRYSGKINKRNTSV 446
+Q++ +SSLTNS + + KIN+ N+ +
Sbjct: 566 TQIKSLESSLTNSQAECVSFQEKINELNSQI 596
>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 408
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 640 SRYFSIDLRFRIFVSNQHYRLALNPYICFQ*NSSSVHLK 524
S+ S ++ + V N +L LNP + + SSVHLK
Sbjct: 211 SKKSSANMIRHLTVCNDFLQLGLNPKLQAKNQQSSVHLK 249
>SPBP23A10.03c |||ACN9 family mitochondrial
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 115
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 333 LHCYSSLSQVERFQSSLTNSIFKKPRYS 416
LH LS ER+ +L N +K+ +YS
Sbjct: 58 LHLVGFLSSWERYADALENESWKQEKYS 85
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 25.0 bits (52), Expect = 9.3
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +1
Query: 433 EILAYLNSFSGIDDTTIQEICKKFVLIPKVPSSVP--KMNFIE--NRYKDSEPNDNVDWK 600
EI A LN F+ + + +C KF + ++ + V + N I+ +E ND + +
Sbjct: 7 EIFAALNDFTDAIVSVPESVCGKFTSLKEIDAQVRDIRQNVIQEIGVVLKNEKNDELSGE 66
Query: 601 RKYEILNQ-LKNI 636
+ E L + LK I
Sbjct: 67 ERCERLQKTLKEI 79
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,535,508
Number of Sequences: 5004
Number of extensions: 52696
Number of successful extensions: 184
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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