Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k13
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0594 - 4859492-4859640,4860113-4860189,4861825-4861925           35   0.063
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    29   3.1  
08_02_0192 + 14048828-14048873,14048960-14051169                       28   7.2  
02_03_0061 + 14582724-14582840,14583360-14584334                       28   7.2  
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37...    27   9.6  

>12_01_0594 - 4859492-4859640,4860113-4860189,4861825-4861925
          Length = 108

 Score = 34.7 bits (76), Expect = 0.063
 Identities = 16/77 (20%), Positives = 35/77 (45%)
 Frame = +1

Query: 259 AFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQFSRNQDIQARSTNEI 438
           + +EED        F+L++  ++ +C  ++P+   N  N+R Q      +D+   S  ++
Sbjct: 15  SIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTGDPAKDVLKDSLQDL 74

Query: 439 LAYLNSFSGIDDTTIQE 489
           +       G  DT + +
Sbjct: 75  MVMCQHVRGTFDTAVTQ 91


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = +1

Query: 469  DDTTIQEICKKFVLIPKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNIE 639
            D+T +  + +K  L+ ++ S+   + F+E+++ D   N       K  + NQ+KN++
Sbjct: 1686 DNTAL--LAEKHKLLSQLESTAVSLKFLEDKHADLRDNHGSLLSEKVLLCNQVKNMQ 1740


>08_02_0192 + 14048828-14048873,14048960-14051169
          Length = 751

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 481 IQEICKKFVLIPKVPSSVPKMNFIENRYKDSEPNDNVDWKR 603
           ++ I  K V +  +PSS P+ NF+++    S+ N    W R
Sbjct: 491 LESITSKCVAVEWLPSSYPEFNFVQSLMM-SQKNCQTIWNR 530


>02_03_0061 + 14582724-14582840,14583360-14584334
          Length = 363

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/78 (21%), Positives = 36/78 (46%)
 Frame = +1

Query: 403 NQDIQARSTNEILAYLNSFSGIDDTTIQEICKKFVLIPKVPSSVPKMNFIENRYKDSEPN 582
           N++IQ      IL + + F      T+    K+  L+P  PS   ++ FI    ++    
Sbjct: 83  NEEIQTSDCTAIL-FRDGFDKDYGNTLNYFSKRKPLVPLPPSDPMELGFIRETVRELTSI 141

Query: 583 DNVDWKRKYEILNQLKNI 636
            + +W R+ ++ +++  I
Sbjct: 142 MSNEWLREAKLSSEVIRI 159


>09_01_0015 +
           370242-370306,370429-370497,371087-371161,371558-371591,
           371659-373132,373193-373310,373374-373419
          Length = 626

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/57 (21%), Positives = 30/57 (52%)
 Frame = +1

Query: 157 MLSYGKFANLNIFTLEGITIIKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKI 327
           +L+  K   L  ++L+G T    +  NAL+  YD F  +  ++ ++ + ++  ++ +
Sbjct: 549 LLAENKVNGLAGYSLDGSTSHGPQVCNALQGSYDIFAIDPAEKNQKADIVIKAIENV 605


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,312,379
Number of Sequences: 37544
Number of extensions: 235851
Number of successful extensions: 669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)