BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k13
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion pr... 34 0.37
BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA doma... 34 0.49
BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA doma... 34 0.49
BC029502-1|AAH29502.1| 586|Homo sapiens hypothetical protein FL... 33 0.65
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 32 1.5
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 32 1.5
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 32 1.5
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 32 1.5
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 32 1.5
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 32 1.5
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 32 1.5
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 32 1.5
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 32 1.5
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 32 1.5
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 32 1.5
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 32 1.5
AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein. 32 1.5
>L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion protein
protein.
Length = 2311
Score = 34.3 bits (75), Expect = 0.37
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 RKQYDAFLEEDKKRRERNEFILDRLDK-IRYCTATVPYRKSNVSNLRSQIQFSRNQDIQA 420
++Q D + E+KK +++ E + DR+ K +Y A + + + ++ S+ Q S++
Sbjct: 2061 KQQADLHMREEKKMKQKAELMTDRVGKAFKYLEAVLSFIECGIAT-ESESQSSKSAYSVY 2119
Query: 421 RSTNEILAYLNSFSGIDDTTIQEICKKFVLI 513
T +++ ++ S D T K F ++
Sbjct: 2120 SETVDLIKFIMSLKSFSDATAPTQEKIFAVL 2150
>BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 33.9 bits (74), Expect = 0.49
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY R N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQRLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 33.9 bits (74), Expect = 0.49
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY R N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQRLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC029502-1|AAH29502.1| 586|Homo sapiens hypothetical protein
FLJ31438 protein.
Length = 586
Score = 33.5 bits (73), Expect = 0.65
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 187 NIF--TLEGITIIKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKI-RYCTATVPYR 357
N+F +E IT KS + +++K+YDAF+E KK R + +L + TA V YR
Sbjct: 55 NVFDKVIEHITAYKSI-LTSIKKEYDAFIETIKKDRRTTFCLHGKLKGLAAEPTALVYYR 113
Query: 358 KSNVS-NLRSQIQFSRNQDIQAR 423
K + + +I S + IQ++
Sbjct: 114 KRTIQLEAKMRIIESNSSKIQSQ 136
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 151 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 210
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 211 VQKQEAMRRATVE 223
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 88 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 147
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 148 VQKQEAMRRATVE 160
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 151 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 210
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 211 VQKQEAMRRATVE 223
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 103 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 162
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 163 VQKQEAMRRATVE 175
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 102 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 161
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 162 VQKQEAMRRATVE 174
>AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 217 IKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQF 396
+KSE+I A ++ L E+ ++ + D+L + RY + N NLR Q +
Sbjct: 61 LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEES 120
Query: 397 SRNQDIQARSTNE 435
+ Q+ R+T E
Sbjct: 121 VQKQEAMRRATVE 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,680,459
Number of Sequences: 237096
Number of extensions: 1447850
Number of successful extensions: 3543
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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