Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k13
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 3.7
AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical... 29 3.7
AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical ... 29 3.7
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical ... 28 6.5
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Frame = +1
Query: 181 NLNIFTLEGITIIKSERINALRKQYDAFLEEDKKRRERNEFI-LDRLDKIRYCTATVPYR 357
NL TL+ K +++ +++ +A L+E K++ + + + D Y V
Sbjct: 236 NLTKLTLQTFIAWKKKKLRERKEKEEADLKEKKEKIKSGKHNGMSGRDLFLYDANLV--- 292
Query: 358 KSNVSNLRSQIQFSRNQDIQARSTNEILAYLNSFSGIDDTTIQEICKKFVLIPKVPSSVP 537
+N + I+ + + + EI A F G+DD ++ K + +
Sbjct: 293 -NNDDDEAGDIEMEKEEVDENEKVFEIDANFFKFDGMDDELTDQMSKSSTAVESTAKGMA 351
Query: 538 KMNFIENRYKDSEPNDNVD 594
KM+ E+ + E +N+D
Sbjct: 352 KMDINEDLFDIDEDVENLD 370
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 421 RSTNEILAYLNSFSGIDDTTIQEICKKFVLIPKVPS--SVPKMNFI-ENRYKDSEPNDNV 591
R+ N+I L ++ ++ +E + L+P+ PS SV F+ ENR K S +
Sbjct: 255 RANNKI--DLENYDSYEEDFDEEYEQSNELVPQRPSENSVDLSTFVVENREKQSRKSKRN 312
Query: 592 DWKRKYEILNQLK 630
D + YEI+ LK
Sbjct: 313 DNEMSYEIVESLK 325
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 187 NIFTLEGITIIKSERINALRKQYDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKS- 363
N+ + + + E+ N L+ + +E K E +EF+LD + K Y S
Sbjct: 732 NLGSSSFVASLTQEQANCLQNAMNTAKDEMSKNNEDDEFLLDEIRKTPPKEVPRSYNNSP 791
Query: 364 -NVSNLRSQIQFSRNQDIQARSTN 432
SNL S + S N + R ++
Sbjct: 792 FKPSNLDSSVHRSYNNNSPFRPSS 815
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 KSERINALRKQYDAFLEEDKKRRERNEFILDRLDK-IRYCTATVPYRKSNVSNLRSQIQF 396
+SE + ++ DA LEE+KKR E L+ +K R A+V R + VS S++
Sbjct: 626 ESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSE 685
Query: 397 SRNQDIQARSTNEIL 441
+ + ++ S E L
Sbjct: 686 LKGKLTESNSFIEEL 700
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 KSERINALRKQYDAFLEEDKKRRERNEFILDRLDK-IRYCTATVPYRKSNVSNLRSQIQF 396
+SE + ++ DA LEE+KKR E L+ +K R A+V R + VS S++
Sbjct: 628 ESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSE 687
Query: 397 SRNQDIQARSTNEIL 441
+ + ++ S E L
Sbjct: 688 LKGKLTESNSFIEEL 702
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 253 YDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQFSRNQDIQA 420
Y + LEE K RR RN + DR+ K R RK + +R Q + S D+QA
Sbjct: 337 YTSILEE-KVRRRRNNWSWDRMQKHRQLV-----RKYQKAWVRRQTEASPGADVQA 386
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 253 YDAFLEEDKKRRERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQFSRNQDIQA 420
Y + LEE K RR RN + DR+ K R RK + +R Q + S D+QA
Sbjct: 337 YTSILEE-KVRRRRNNWSWDRMQKHRQLV-----RKYQKAWVRRQTEASPGADVQA 386
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 KSERINALRKQYDAFLEEDKKRRERNEFILDRLDK-IRYCTATVPYRKSNVSNLRSQIQF 396
+SE + ++ DA LEE+KKR E L+ +K R A+V R + VS S++
Sbjct: 628 ESEDREKIVREKDAHLEENKKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSE 687
Query: 397 SRNQDIQARSTNEIL 441
+ + ++ S E L
Sbjct: 688 LKGKLTESNSFIEEL 702
>AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical
protein Y53C10A.6b protein.
Length = 345
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 289 ERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQFSRNQDIQ 417
E+ EFI LDK T TVP + + RSQI + QD +
Sbjct: 207 EQKEFINVLLDK---STKTVPQIDAKIEQKRSQIGYEEEQDFE 246
>AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical
protein Y53C10A.6a protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 289 ERNEFILDRLDKIRYCTATVPYRKSNVSNLRSQIQFSRNQDIQ 417
E+ EFI LDK T TVP + + RSQI + QD +
Sbjct: 207 EQKEFINVLLDK---STKTVPQIDAKIEQKRSQIGYEEEQDFE 246
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 224 RNELTHSENNMTLFLKKIRKEGSVMNSYWTDWI---KYDIALLQFPIASRTFPIFAHKFN 394
+NEL NM + ++++ + YW DWI + +I+ L + + +H +
Sbjct: 511 KNELIE-RFNMIMSCIALKRKFDIQEDYWKDWIHGCRQNISKLLNHCHQFVYDVNSHSYG 569
Query: 395 FQETK 409
+E+K
Sbjct: 570 LRESK 574
>AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical
protein Y4C6A.3 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 451 LNTLVFRLLILPEYLGFLKIEFVSEDWKRSTCDRE 347
L + + L+ + + G LKI V+ DWK T D E
Sbjct: 53 LRFIPYALVFITMFTGILKIGIVAYDWKFKTEDLE 87
>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical
protein F20G4.1 protein.
Length = 1615
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 247 KQYDAFLEEDKKRRERNEFILDRLDKI--RYCTATVPYRKSNVSNLRSQIQF 396
K+ D EE + E+N+ I +RLDKI + A R NV N+ ++ F
Sbjct: 636 KREDGETEEQWELEEQNDGIYERLDKILMEHPDAESLIRSINVGNIPNEETF 687
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,343,453
Number of Sequences: 27780
Number of extensions: 272306
Number of successful extensions: 894
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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