Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k13
(643 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.27
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 25 0.47
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.9
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 2.5
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 7.7
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 26.2 bits (55), Expect = 0.27
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 556 NRYKDSEPNDNVDWKRK 606
+RYK+ E N+N +W+ K
Sbjct: 177 DRYKEEESNENYNWEHK 193
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 25.4 bits (53), Expect = 0.47
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 640 SRYFSIDLRFRIFVSNQHYRLALNPY 563
SR F L FR+F S Q+ R +PY
Sbjct: 304 SRDFLSSLAFRVFQSTQYIRHIKSPY 329
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 514 PKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNI 636
PK+ SS+ N YK + N+N + K+ Y +N ++ I
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYN-KKLYYNINYIEQI 118
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 66 KKSDRQYRK*TSEEKQ 19
+K DRQY K +EE++
Sbjct: 13 RKKDRQYEKLCNEEEK 28
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 514 PKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNI 636
PK+ SS+ N YK + N+N + K+ Y +N ++ I
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYN-KKLYYNINYIEQI 118
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 66 KKSDRQYRK*TSEEKQ 19
+K DRQY K +EE++
Sbjct: 13 RKKDRQYEKLCNEEEK 28
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 514 PKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNI 636
PK+ SS+ N YK + N+N + K+ Y +N ++ I
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYN-KKLYYNINYIEQI 118
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 66 KKSDRQYRK*TSEEKQ 19
+K DRQY K +EE++
Sbjct: 13 RKKDRQYEKLCNEEEK 28
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 514 PKVPSSVPKMNFIENRYKDSEPNDNVDWKRKYEILNQLKNI 636
PK+ SS+ N YK + N+N + K+ Y +N ++ I
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYN-KKLYYNINYIEQI 118
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 66 KKSDRQYRK*TSEEKQ 19
+K DRQY K +EE++
Sbjct: 13 RKKDRQYEKLCNEEEK 28
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 181 NLNIFTLEGITIIKSERINALRKQ 252
N+N +TL+G+ ++ ++ LR Q
Sbjct: 1224 NINTYTLDGVGSVEKTGVSTLRGQ 1247
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 615 DFVFSFPINIIVWL*ILISVFNEIHLRYT*RNFRNQYKLFTYFLNRC 475
D + +F ++ +WL S+ N I R+FR ++ YF RC
Sbjct: 402 DAIPAFLSSLFLWLGYCNSLLNPIIYATLNRDFRKPFREILYF--RC 446
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 526 SSVPKM-NFIENRYKDSEPNDNVDWKRKYEILNQLKNIEK 642
S PK+ + + N YK S N+ ++ +K N + NIE+
Sbjct: 76 SKEPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQ 115
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 354 IGNCSSAISYFIQSVQYEFITLPSFL 277
+G + +SYFI+ + + I L S L
Sbjct: 445 LGVQGALLSYFIEPIYFHSIVLGSLL 470
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,305
Number of Sequences: 438
Number of extensions: 3910
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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