Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k12
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   2.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.8  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 90  VGTITINTVFSLCYA 46
           VGT+ +N V + CYA
Sbjct: 236 VGTLVVNDVVASCYA 250


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 626 NIFENGCY 603
           N+FENGCY
Sbjct: 222 NMFENGCY 229


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 200 STMRYFLLNINQISITKRFSKWLPYFNRL 114
           S +  +L N+N +++T +  KW   F  L
Sbjct: 141 SDVTLWLSNVNSLTLTLKRKKWNLLFKTL 169


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 200 STMRYFLLNINQISITKRFSKWLPYFNRL 114
           S +  +L N+N +++T +  KW   F  L
Sbjct: 67  SDVTLWLSNVNSLTLTLKRKKWNLLFKTL 95


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 88  YMGRCHLNHRRLKYGNHFEKRF 153
           + G  H+  ++L+YG H  + +
Sbjct: 49  FFGNHHIQQQQLQYGYHNHQNY 70


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 88  YMGRCHLNHRRLKYGNHFEKRF 153
           + G  H+  ++L+YG H  + +
Sbjct: 49  FFGNHHIQQQQLQYGYHNHQNY 70


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 88  YMGRCHLNHRRLKYGNHFEKRF 153
           + G  H+  ++L+YG H  + +
Sbjct: 49  FFGNHHIQQQQLQYGYHNHQNY 70


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 88  YMGRCHLNHRRLKYGNHFEKRF 153
           + G  H+  ++L+YG H  + +
Sbjct: 49  FFGNHHIQQQQLQYGYHNHQNY 70


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 581 SKLKLPLGSIRFQKCFD 631
           SKL +P+G I  ++C D
Sbjct: 237 SKLLIPVGHIPIRQCDD 253


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 87  LHGALSFKS*TIKIRQPLRKAFRNRNLVNVQ*KIAHGACRDTVAEFKRLF 236
           L  A+S    + K+   + K   N +++NV     HGA    V  +  L+
Sbjct: 176 LSAAVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGAFEPFVGHYAPLY 225


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 87  LHGALSFKS*TIKIRQPLRKAFRNRNLVNVQ*KIAHGACRDTVAEFKRLF 236
           L  A+S    + K+   + K   N +++NV     HGA    V  +  L+
Sbjct: 177 LSAAVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGAFEPFVGHYAPLY 226


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 87  LHGALSFKS*TIKIRQPLRKAFRNRNLVNVQ*KIAHGACRDTVAEFKRLF 236
           L  A+S    + K+   + K   N +++NV     HGA    V  +  L+
Sbjct: 177 LSAAVSGGIASCKLSYDIAKVAENLDMINVMAYDFHGAFEPFVGHYAPLY 226


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 72  NTVFSLCYAQFGL 34
           N VF LC   FGL
Sbjct: 197 NIVFGLCLTTFGL 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,763
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)