Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k07
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = +2

Query: 467 SGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNF 646
           +GP  ++ ++  V ++         D  + T+TS +   N  +  F  K    +P+    
Sbjct: 185 AGPRTESAVYEPVRIMGVHRPGFDNDCNKNTSTSKEIALNNDVLLFFVKVFRPEPLCERL 244

Query: 647 YEAQYDDYV 673
           +EA  ++YV
Sbjct: 245 FEASREEYV 253


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 119  VNFRVLTRAMSTVAKSFEASQV 184
            +NF ++T+AM  V    +ASQ+
Sbjct: 1332 LNFLIITQAMFLVVGQLQASQI 1353


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 306 NGTRSQDSTTLWP*PTLMRRPVKNPHFANGTTGWLATSRATR*TPAKLCPSTW 464
           +G    D T L P PT+    + +P   +G       ++  R  PA+  P  W
Sbjct: 75  SGMVHNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR-SPYEW 126


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 306 NGTRSQDSTTLWP*PTLMRRPVKNPHFANGTTGWLATSRATR*TPAKLCPSTW 464
           +G    D T L P PT+    + +P   +G       ++  R  PA+  P  W
Sbjct: 75  SGMVHNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR-SPYEW 126


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +2

Query: 473 PPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPI 634
           P   + L     L+ K    L  + P   +     R   +IAE A  Y  GDPI
Sbjct: 197 PRHASDLDNCNHLMTKYEPDLDMNHPGFADKEYRARRK-EIAEIAFAYKYGDPI 249


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 456 WDKVSPEFTSLP 421
           W K+ P FTSLP
Sbjct: 228 WAKLVPHFTSLP 239


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 489 ACTDTCSSCTNNHRSSHSTSRD 554
           ACTD  SSC +    S S   D
Sbjct: 32  ACTDDLSSCWSEDMGSFSLPLD 53


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 409 WQHPGQRG 432
           W++PGQRG
Sbjct: 141 WEYPGQRG 148


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 409 WQHPGQRG 432
           W++PGQRG
Sbjct: 145 WEYPGQRG 152


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 486  QACTDTCSSCTNNHRSSHSTSRDSLTLRATNVP 584
            Q   D   + TNN R+  +TS  S+     N+P
Sbjct: 995  QKLCDKTETHTNN-RTHSATSNSSVNANTNNIP 1026


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,993
Number of Sequences: 336
Number of extensions: 4439
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)