Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k07
(725 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT) iden... 95 3e-20
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 94 7e-20
At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT) id... 86 2e-17
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 86 2e-17
At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identi... 85 5e-17
At2g27550.1 68415.m03338 centroradialis protein, putative (CEN) ... 84 8e-17
At3g19650.1 68416.m02490 cyclin-related contains weak similarity... 33 0.19
At5g01280.1 68418.m00037 expressed protein 31 0.78
At4g29050.1 68417.m04155 lectin protein kinase family protein co... 29 2.4
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 29 3.1
At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX) ... 29 4.1
At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX) ... 29 4.1
At5g47430.1 68418.m05844 expressed protein 28 5.5
At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containi... 28 7.2
At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containi... 28 7.2
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 27 9.6
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 27 9.6
At4g31210.1 68417.m04432 DNA topoisomerase family protein simila... 27 9.6
At4g25170.1 68417.m03624 expressed protein 27 9.6
At4g04470.1 68417.m00649 peroxisomal membrane protein 22 kDa (PM... 27 9.6
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 27 9.6
>At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT)
identical to SP|Q9XFK7 MOTHER of FT and TF1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 173
Score = 95.5 bits (227), Expect = 3e-20
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Frame = +2
Query: 179 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYYTLAMTDP 355
+V+ DV+ P A + V Y + G E+ P+ + P V + YTL MTDP
Sbjct: 12 RVIGDVLDMFIPTANMSV-YFGPKHITNGCEIKPSTAVNPPKVNISGHSDELYTLVMTDP 70
Query: 356 DAPSRKEPTFREWHHWLVGNIQ-GNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 532
DAPS EP REW HW+V +I G + G+ + Y+ PP G+HRY+ +L++Q S
Sbjct: 71 DAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPP--VGIHRYILVLFRQNSP 128
Query: 533 LTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 658
+ L RANF FA ++LG P+A ++ AQ
Sbjct: 129 V-----GLMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQ 165
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 94.3 bits (224), Expect = 7e-20
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Frame = +2
Query: 176 SQVVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP-GQYYTLAMT 349
S+VV DV+ P + L+V Y EV G +L P+QV+++P V+ E +YTL M
Sbjct: 12 SRVVGDVLDPFNRSITLKVTYGQR-EVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMV 70
Query: 350 DPDAPSRKEPTFREWHHWLVGNIQGNE-VNSGETLSQYVGSGPPEKTGLHRYVFLLYKQP 526
DPD PS P RE+ HWLV +I G + Y P G+HR VF+L++Q
Sbjct: 71 DPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCY--ENPSPTAGIHRVVFILFRQL 128
Query: 527 SKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 658
+ T P R NF EFA+ YNLG P+A FY Q
Sbjct: 129 GRQTVYAP-------GWRQNFNTREFAEIYNLGLPVAAVFYNCQ 165
>At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT)
identical to SP|Q9FIT4 BROTHER of FT and TFL1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 86.2 bits (204), Expect = 2e-17
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Frame = +2
Query: 146 MSTVAKSFEASQVVPDVIPKA-PAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEP 322
MS + +V+ DV+ P+ ++V + S V G+EL P+ + +P V+ +
Sbjct: 1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60
Query: 323 -GQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLH 496
++TL M DPDAPS P RE+ HW+V +I G + + G + +Y P G+H
Sbjct: 61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRY--ETPKPVAGIH 118
Query: 497 RYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 658
RYVF L+KQ + + + + R F F+ + L P+A ++ AQ
Sbjct: 119 RYVFALFKQRGR------QAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQ 166
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 86.2 bits (204), Expect = 2e-17
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Frame = +2
Query: 182 VVPDVI-PKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQ-YYTLAMTDP 355
VV DV+ P L+V Y EV G +L P+QV ++P V+ + + +YTL M DP
Sbjct: 14 VVGDVLDPFTRLVSLKVTYGHR-EVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDP 72
Query: 356 DAPSRKEPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLLYKQPSK 532
D PS P RE+ HWLV +I N+ G + Y PP +G+HR V +L++Q +
Sbjct: 73 DVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPP--SGIHRIVLVLFRQLGR 130
Query: 533 LTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDD 667
T P R F EFA+ YNLG P+A +++ Q ++
Sbjct: 131 QTVYAP-------GWRQQFNTREFAEIYNLGLPVAASYFNCQREN 168
>At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identical
go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 85.0 bits (201), Expect = 5e-17
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Frame = +2
Query: 179 QVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMTD 352
+VV DV+ P + V Y + +V G+EL P+ V +P V+ + ++TL M D
Sbjct: 16 RVVGDVLDFFTPTTKMNVSY-NKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMID 74
Query: 353 PDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPS 529
PD P +P +E HW+V NI G + G+ + Y P G+HR+VF+L++Q
Sbjct: 75 PDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSY--ELPRPSIGIHRFVFVLFRQKQ 132
Query: 530 KLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 658
+ R+ + R +F +FA +Y+LG P+A F+ AQ
Sbjct: 133 R------RVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQ 169
>At2g27550.1 68415.m03338 centroradialis protein, putative (CEN)
strong similarity to SP|Q41261 CENTRORADIALIS protein
{Antirrhinum majus}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 84.2 bits (199), Expect = 8e-17
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Frame = +2
Query: 179 QVVPDVIPKAPAAL-LQVKYPSGVEVKEGNELTPTQVKDEPSVK-WDAEPGQYYTLAMTD 352
+V+ DV+ A+ + V Y S +V G+EL P+ V +P V+ + ++TL MTD
Sbjct: 13 RVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTD 72
Query: 353 PDAPSRKEPTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPS 529
PD P +P RE HW+V +I G +V+ G+ + Y P G+HR+V+LL+KQ
Sbjct: 73 PDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGY--EMPRPNIGIHRFVYLLFKQTR 130
Query: 530 KLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQ 658
+ + + S R F EFA + +LG P+A F+ Q
Sbjct: 131 R-----GSVVSVPS-YRDQFNTREFAHENDLGLPVAAVFFNCQ 167
>At3g19650.1 68416.m02490 cyclin-related contains weak similarity to
Cylicin I (Multiple-band polypeptide I)
(Swiss-Prot:P35662) [Bos taurus]
Length = 302
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 334 HSGHDRP*CAVP*RTHISRMAPLAGWQHPGQR--GKLRRNFVPVRGLWTSGKDR 489
HSGH A P + + R P + QH +R GK+ R VRG W S +D+
Sbjct: 81 HSGHHETTKAAPHLSQVPRSRPYS--QHDDRRSDGKVDRRPTSVRGSWRSSRDQ 132
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 531 SSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRSMTTTS 674
SS STSR R + P +K PS+P S RAT T S T+++
Sbjct: 90 SSRSTSRPPTPTRKSKTP-AKRPSTPTSRATSTTTRATLTSSSTTSST 136
>At4g29050.1 68417.m04155 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 669
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 507 SSCTNNHRSSHSTSRDSLTLRAT--NVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSLF 680
+S T RSSH + L T N+ IS+LP PR + R+TS K+ + SL
Sbjct: 241 TSATGRLRSSHYILGWTFKLNGTASNIDISRLPKLPRDS------RSTSVKK-ILAISLS 293
Query: 681 CTSSSVLKY 707
TS ++L +
Sbjct: 294 LTSLAILVF 302
>At5g17920.1 68418.m02101
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 765
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 119 VNFRVLTRAMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEP 298
V++ +L++A V KSFE ++P ++P + ++K ++ P V D
Sbjct: 159 VSYLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDE---PVLVMDLE 215
Query: 299 SVKWDAEPGQYYTLAMT 349
K A G Y L T
Sbjct: 216 GQKLQAFTGAYAELEST 232
>At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX)
identical to stromal ascorbate peroxidase [Arabidopsis
thaliana] gi|1419388|emb|CAA67425
Length = 372
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +3
Query: 528 RSSHSTSRDSLTLRATNVP--ISKLPSSPR----STT*GIRLRATSTKRSMTTTSLFCTS 689
RSS S+SR +LTL A++ + L SSPR S+ + R S RS +T+ S
Sbjct: 40 RSSSSSSRSTLTLSASSSLSFVRSLVSSPRLSSSSSLSQKKYRIASVNRSFNSTTAATKS 99
Query: 690 SS 695
SS
Sbjct: 100 SS 101
>At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX)
identical to stromal ascorbate peroxidase [Arabidopsis
thaliana] gi|1419388|emb|CAA67425
Length = 372
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +3
Query: 528 RSSHSTSRDSLTLRATNVP--ISKLPSSPR----STT*GIRLRATSTKRSMTTTSLFCTS 689
RSS S+SR +LTL A++ + L SSPR S+ + R S RS +T+ S
Sbjct: 40 RSSSSSSRSTLTLSASSSLSFVRSLVSSPRLSSSSSLSQKKYRIASVNRSFNSTTAATKS 99
Query: 690 SS 695
SS
Sbjct: 100 SS 101
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 533 LTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILY 685
+T EPR+ N D +A + + DP A F E +YD++ LY
Sbjct: 84 ITTQEPRIQNKVEDVQAE------TTNFPVADPSAAEFPEDEYDEFGTDLY 128
>At1g76510.2 68414.m08903 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 350 DPDAPSRKEPTFREWHHWLVGNIQGNEVN 436
DP +P E + ++W WL+ + + EV+
Sbjct: 109 DPSSPHVPEESVKKWKTWLLSDAEAREVD 137
>At1g76510.1 68414.m08902 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 434
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 350 DPDAPSRKEPTFREWHHWLVGNIQGNEVN 436
DP +P E + ++W WL+ + + EV+
Sbjct: 109 DPSSPHVPEESVKKWKTWLLSDAEAREVD 137
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 450 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS-RDSLTLRATN 578
C W +DL + + C ++ +N H S S RD + L N
Sbjct: 290 CVGVWVVDLSRTEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNN 333
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 450 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS-RDSLTLRATN 578
C W +DL + + C ++ +N H S S RD + L N
Sbjct: 290 CVGVWVVDLSRTEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNN 333
>At4g31210.1 68417.m04432 DNA topoisomerase family protein similar
to DNA Topoisomerase I (SP:Q9X3X7) {Zymomonas mobilis}
Length = 1280
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 429 SLPWMLPTSQWCHSRNVGSLRDGASGSVMA 340
S+ W +P+S W H +++ +GA ++A
Sbjct: 520 SMVWEVPSSAWTHIKSIKVALNGAENLILA 549
>At4g25170.1 68417.m03624 expressed protein
Length = 344
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Frame = -3
Query: 531 FDGCLYK---RNTYLCRPVFSGG---PEPTYWDKVSPEFTS-LPWMLPTSQWCHSRNV 379
FD Y R+ Y C P GG P T P F S WM P+ CHSR +
Sbjct: 139 FDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTL 196
>At4g04470.1 68417.m00649 peroxisomal membrane protein 22 kDa
(PMP22) identical to peroxisomal membrane protein
[Arabidopsis thaliana] gi|3980254|emb|CAA06834
Length = 190
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 461 VGSGPPEKTGLHRYVFLLYKQP 526
+GS PP+KT L RY+ L + P
Sbjct: 1 MGSSPPKKTTLQRYLSQLQQHP 22
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 480 KRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRS 659
K Q+ T T + S +R T+R +N+P + S P+ TT + S
Sbjct: 92 KLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSP 151
Query: 660 MTTTSLFCTSSS 695
T S T SS
Sbjct: 152 KRTVSRSLTPSS 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,702,722
Number of Sequences: 28952
Number of extensions: 377817
Number of successful extensions: 1086
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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