Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k06
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 33 0.23
05_04_0367 - 20672776-20673550,20674097-20674320,20674626-206748... 32 0.40
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 31 0.91
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 31 0.91
03_04_0195 - 18356157-18356741 30 1.6
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 30 2.1
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 29 2.8
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 29 3.7
04_04_0388 + 24873624-24873806,24873908-24873979,24874088-248741... 29 4.9
09_02_0565 + 10710770-10711003,10711368-10711527,10712277-107124... 28 6.4
07_03_1137 - 24220597-24220619,24220694-24221414,24221513-242217... 28 6.4
06_01_0143 + 1087381-1087499,1088519-1088599,1088654-1088702 28 6.4
03_05_0543 - 25404630-25405408,25405461-25405605 28 6.4
01_05_0458 + 22432192-22432309,22433980-22434296 28 6.4
05_05_0290 - 23879064-23880035 28 8.5
05_03_0393 + 13435581-13435745,13435804-13436418,13437283-134373... 28 8.5
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 205 GAKIVPTVEAAKTE--VPTKPPPMRLNELPLYDNPHQIYKDYLEDLE--KCPKAKSKMLH 372
G + + A K E PT PP R LPL P + D E LE K P K+++
Sbjct: 172 GHGVSSKIAAPKEEHVTPTMDPPSRCEHLPLEVAPSNLVTDKAELLEITKAPAVKNRLAK 231
Query: 373 EYLQPHVTA 399
Q +TA
Sbjct: 232 RVRQKIITA 240
>05_04_0367 -
20672776-20673550,20674097-20674320,20674626-20674843,
20675133-20676534
Length = 872
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 229 EAAKTEVPTKPPPMRLNELPLYD--NPHQIYKDYLEDLEKCPKAKSKMLHEYLQPHVTAL 402
EAA P PPPM + E+ +D NP Y DY + L + A P+ + +
Sbjct: 242 EAAAAAAPAPPPPMPMPEVSPWDFFNPFDSY-DYNQQLPQYKDANGSFTS---SPNSSEV 297
Query: 403 RMSAQCNYCDFKCELESMKEEI 468
R + + E ESM+E I
Sbjct: 298 REREGIPELEEETEQESMRESI 319
>04_04_1189 + 31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/88 (22%), Positives = 40/88 (45%)
Frame = +1
Query: 211 KIVPTVEAAKTEVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSKMLHEYLQPH 390
K++P + + K EV + PP +R ++ + ++ L++LE+ L +L P
Sbjct: 1218 KLIPLLVSGKMEVGSLPPSLRSLDIDMDPELSTVWDLKLQELEQGVNQLQSRLLSFL-PT 1276
Query: 391 VTALRMSAQCNYCDFKCELESMKEEICV 474
+T L +SA + EE+ +
Sbjct: 1277 ITTLVISASPELTSLQLGYSKALEELII 1304
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +1
Query: 289 LYDNPHQIYKDYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCELESMKEEI 468
LYDN + Y ++ C K K K+ H+ Q + L + +Q + EL+++ +I
Sbjct: 455 LYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQEFLKCLHIYSQ--EIITRSELKNLVNDI 512
Query: 469 CVSMRKAKTDFKAYMRDPKNLE 534
F ++ +N++
Sbjct: 513 LQQHPDLMDGFNEFLEHCENID 534
>03_04_0195 - 18356157-18356741
Length = 194
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 219 ANSRSGQNRSANKTASNAPKRASPVRQPTP 308
ANS S + N TA+ A KR SP R TP
Sbjct: 144 ANSNSSAEANNNPTATRAQKRPSPERPRTP 173
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 222 NSRSGQNRSANKTASNAPKRASPVRQPTPDIQ 317
N + +++S+NKT S+ P+ P QP P ++
Sbjct: 148 NHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 179
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 674 SSVSFGKHKAPPAKAPRLVKNKRPGIPRFEAKRYPLK 564
SS S KAPP K L K + P F Y LK
Sbjct: 765 SSSSKEPEKAPPVKVDELAKKEEPKFQAFSGTSYSLK 801
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 106 PPCPEDTSSEDDSHLDLYIIGKLW-IDALRSALLGAKIVPTVEAAKTEVPTKPPPM-RLN 279
P D + DS L + G LW + A +ALLG ++ VPT P M ++
Sbjct: 262 PAVQVDPTGAGDSFLAGFASGLLWGLSATDAALLG-NFFGAAAVSQVGVPTFDPKMLQVF 320
Query: 280 ELPLYDNPH 306
P+Y N H
Sbjct: 321 TEPVYSNMH 329
>04_04_0388 +
24873624-24873806,24873908-24873979,24874088-24874150,
24874413-24874764,24874869-24875060,24875356-24875774
Length = 426
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 91 DTDSLPPCPEDTSS-EDDSHLDLYIIGKLWIDALRSALLGAKIVPTVEAAKTEVPTKPPP 267
D D+ P TS + + D Y + K W+ AL L PT E+P PPP
Sbjct: 367 DEDATYPIEVTTSKGKVELRADDYGVYKRWVTALTHMLAA----PTAICKAHELPPPPPP 422
Query: 268 MRLN 279
R N
Sbjct: 423 HRRN 426
>09_02_0565 +
10710770-10711003,10711368-10711527,10712277-10712477,
10712564-10712628,10712740-10712767,10712847-10712923,
10713023-10713109,10713572-10713622,10713857-10713937,
10714125-10714346,10714424-10714517,10714608-10714748,
10716383-10716444,10716519-10717106
Length = 696
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 478 CLHRFLLSCFLIHI*NHSNCIVLTFLKQSREAASTHAASLIWLLDIFLDL 329
C H F C + H NC V F R S ++ S + +++ LDL
Sbjct: 624 CNHIFHQECITPWVKGHGNCPVCRFALCERNTVSDNSQSGVGEVEVDLDL 673
>07_03_1137 -
24220597-24220619,24220694-24221414,24221513-24221731,
24221805-24222505,24223127-24223376
Length = 637
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 319 DYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCE 444
DY + E CP + +M+H +L+ L + Q N CE
Sbjct: 146 DYPQQYEGCPLLQLEMIHHFLKSCENWLSVEGQHNMLLMHCE 187
>06_01_0143 + 1087381-1087499,1088519-1088599,1088654-1088702
Length = 82
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Frame = +1
Query: 283 LPLYDNPHQIYKDYLEDLE----KCP 348
LPLY NPHQ+ DY E L KCP
Sbjct: 24 LPLYRNPHQL--DYFEGLREFIGKCP 47
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -3
Query: 644 PPAKAPRLVKNKR-PGI--PRFEAKRYPLKAPIPTTPCLSSKF 525
PP PR PG+ P +R P AP P TP LS +F
Sbjct: 133 PPQPEPRRPPAAPLPGVRTPPSPPRRAPAPAPAPLTPALSQRF 175
>01_05_0458 + 22432192-22432309,22433980-22434296
Length = 144
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 184 ALRSALLGAKIVPTVEAAKTEVPTKP--PPMRLNELPLYDNPHQIYKDYLEDLEK 342
A +A + A P AA+T PT P PP R+ D Q+YK LE+ K
Sbjct: 59 AAAAAAVVALSSPAAPAAETVDPTPPTPPPKRVLPPIPEDEQRQVYKWMLEEKRK 113
>05_05_0290 - 23879064-23880035
Length = 323
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 499 SQS*LFSCLHRFLLSCFLIHI*NHSNCIVLTFLKQSREAASTHAASLI 356
SQ+ C H+F SC L + HS+C V F S E + S I
Sbjct: 210 SQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNI 257
>05_03_0393 +
13435581-13435745,13435804-13436418,13437283-13437349,
13437605-13438239
Length = 493
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 85 NLDTDSLPPCPEDTSSEDDSHLDLYIIG 168
NLD D DT +DD+ +DL ++G
Sbjct: 325 NLDNDGAVDLDHDTDLDDDTGIDLDVVG 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,936,932
Number of Sequences: 37544
Number of extensions: 374789
Number of successful extensions: 1424
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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