Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k06
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-9|AAK21418.1|  201|Caenorhabditis elegans Hypothetical pr...    49   4e-06
AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion transpo...    29   3.3  
AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion transpo...    29   3.3  
AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate perme...    29   3.3  
Z81143-4|CAB03516.1|  189|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   7.7  
AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U00052-9|AAK21418.1|  201|Caenorhabditis elegans Hypothetical
           protein K02F3.10 protein.
          Length = 201

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 33/145 (22%), Positives = 62/145 (42%)
 Frame = +1

Query: 265 PMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCE 444
           P+++ +LP+Y   +   K      E  P          LQ     +R++ +  Y D   E
Sbjct: 42  PIKIEQLPIYAEDNAPLKQKFLPEEPLP----------LQREFATIRIACEQEY-DRVAE 90

Query: 445 LESMKEEICVSMRKAKTDFKAYMRDPKNLELRHGVVGIGALSGYLFASKRGIPGRLFFTS 624
              + +      +KA T   AY+ +      +   + +G ++G++   KRG  GRL  T+
Sbjct: 91  RFKVVDCAMTQTKKAATKCNAYLTEEWTALPKAAAITVGGMAGFVLGLKRGPVGRLLTTT 150

Query: 625 LGALAGGALCFPKETDEIFRSAMYH 699
           +G     A C+P E  ++ ++   H
Sbjct: 151 IGLATMAAFCYPIEAVDVAKTGRAH 175


>AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion
           transporter SULP-1b protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 545 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 405
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion
           transporter SULP-1a protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 545 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 405
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate permease
           family protein 1 protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 545 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 405
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>Z81143-4|CAB03516.1|  189|Caenorhabditis elegans Hypothetical
           protein ZK265.6 protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 430 DFKCELESMKEEICVSM-RKAKTDFKAYMRDPKNL 531
           D K  L   + E+CV M  +   DF+A  RDPKNL
Sbjct: 128 DRKFRLFHRETELCVYMLARHGEDFQAMTRDPKNL 162


>U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical
           protein F47D12.9a protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 256 KPPPMRLNELPLYDNPHQIYKDYLED 333
           +PPP+RLNEL     P +I    LED
Sbjct: 23  EPPPVRLNELVTATEPEEIPLPKLED 48


>AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical
           protein C36C9.1 protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 220 PTVEAAKTEVPTKPPPMRLNELPLYDNPHQIYKDYLE 330
           PT ++++   PT PPP   + L  +    Q + DY++
Sbjct: 644 PTEDSSQDAPPTSPPPRISDSLTAFLEAQQDFNDYID 680


>AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical
           protein T22H9.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 225 SRSGQNRSANKTASNAPKRASPVRQPTPDI--QRLFGRSRKMSK 350
           S S  + S+N ++ +AP+  SP    +PD+  QR F + +++ K
Sbjct: 2   SSSSLSSSSNASSLSAPEGLSPNNSLSPDVGAQRFFSQGKRIPK 45


>Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical
           protein W09C5.5 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 605 PGIPRFEAKRYPLKAPIPTTP 543
           PG P  +  R P+  PIPTTP
Sbjct: 151 PGAPGAQPSRPPILPPIPTTP 171


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 313 YKDYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCELESMKEEICVSMRKAK 492
           YK   E+++K  K K K+  E  +  V   +   Q    +F+ E+E +K+ +   + KAK
Sbjct: 713 YKKESEEVKKTGKNKDKV--EKTKEEVEKAKEEFQKVKEEFQKEVEKVKK-VEKELEKAK 769

Query: 493 -TDFKAYMRD 519
            +DFK Y+ D
Sbjct: 770 ESDFKVYLDD 779


>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +1

Query: 556 IGALSGYLFASKRGIPGRLFFTSLGALAGGAL 651
           IG LS    A K G  G LF+ +L ALA  AL
Sbjct: 112 IGGLSSGWLADKVGRRGALFYNNLLALAAAAL 143


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +1

Query: 556 IGALSGYLFASKRGIPGRLFFTSLGALAGGAL 651
           IG LS    A K G  G LF+ +L ALA  AL
Sbjct: 94  IGGLSSGWLADKVGRRGALFYNNLLALAAAAL 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,297,036
Number of Sequences: 27780
Number of extensions: 330111
Number of successful extensions: 1291
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)