Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k05
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 320 IKQALQIYHENYHNSEEWFRFAYSRCVLLG 409
           +K     +H+  HN     +  Y+ C L+G
Sbjct: 7   VKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 320 IKQALQIYHENYHNSEEWFRFAYSRCVLLG 409
           +K     +H+  HN     +  Y+ C L+G
Sbjct: 7   VKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = -2

Query: 215 YYLLHFIDVKC*ILFVILLSH*LQLIPCCA*LVYNDVFCILMRLKY 78
           YY      V   +L  I   + + L+ CCA +++      L+ + Y
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,031
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)