Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k04
         (680 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g18480.1 68414.m02306 calcineurin-like phosphoesterase family...    30   1.2  
At5g56075.1 68418.m06996 hypothetical protein                          29   3.8  
At3g06200.1 68416.m00713 guanylate kinase, putative similar to g...    28   5.0  
At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein ...    28   6.6  
At1g53080.1 68414.m06010 legume lectin family protein                  27   8.7  
At1g10350.1 68414.m01166 DNAJ heat shock protein, putative simil...    27   8.7  

>At1g18480.1 68414.m02306 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 391

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -2

Query: 460 QQPNEGFP*SHPKLRADCSQGPLALTKRALQQSTPGPRRSV---QTPGLASFALTIHSNV 290
           + P EG P S P++RADC +G +     AL+   P  +R +   QT  +   ++ +H  +
Sbjct: 177 KDPYEGIPMSFPRMRADCFEG-IRARIAALRPDGPIAKRFLTKNQTVAVVGDSVFVHGGL 235


>At5g56075.1 68418.m06996 hypothetical protein 
          Length = 256

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 543 LGCSVVFRVSLHGDISTPSI 484
           LGCSVV+ V++H  I+ PS+
Sbjct: 128 LGCSVVYGVNVHSMITKPSV 147


>At3g06200.1 68416.m00713 guanylate kinase, putative similar to
           guanylate kinase (GMP kinase) [Bacillus halodurans]
           Swiss-Prot:Q9K9Y2; contains Pfam profile: PF00625
           guanylate kinase
          Length = 282

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 307 SERMKLGQAFVLTDVVPEYSAVALASLGPKDPGYNQ-LEALDETRENLRWAVGAGVRVLQ 483
           S   +LG +F    ++P  + + +   GP   G +  +  L E RE L + V A  R ++
Sbjct: 68  SLEFQLGSSFTADPIIPPPNQIVIVISGPSGVGKDAVINKLREVREGLHFVVTATSRPMR 127


>At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein /
           YT521-B-like family protein low similarity to cleavage
           and polyadenylation specificity factor 30 kDa subunit
           [Bos taurus] GI:2327052; contains Pfam profiles PF00642:
           Zinc finger C-x8-C-x5-C-x3-H type (and similar),
           PF04146: YT521-B-like family; supporting cDNA
           gi|24415581|gb|AY140901.1|
          Length = 678

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 79  FSKTRCVMNKLNIKLIRKFSDSCQEVSGEINQKLDS 186
           F KTR + N  N  L  K S  CQE+   + ++L S
Sbjct: 382 FHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLAS 417


>At1g53080.1 68414.m06010 legume lectin family protein
          Length = 283

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 370 VALASLGPKDPGYNQLEALDETRENLRWAVGAGV 471
           +  A LGP   G ++  AL  TR+N+ ++ G G+
Sbjct: 39  IGYAELGPATDGMSRSGALSMTRDNIPFSHGQGL 72


>At1g10350.1 68414.m01166 DNAJ heat shock protein, putative similar
           to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat
           shock 40 kDa protein 1) {Mus musculus}; contains Pfam
           profile PF00226: DnaJ domain
          Length = 349

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 490 LDFVGPSHQLQQPNEGFP*SHPKLRAD 410
           LD V P  ++  PNEG P   P  R D
Sbjct: 295 LDIVKPGQEIVIPNEGMPTKDPLKRGD 321


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,699
Number of Sequences: 28952
Number of extensions: 217422
Number of successful extensions: 616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)