Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k03
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0213 + 1628974-1629339,1629441-1629590,1630935-1631095,163... 29 4.0
05_04_0044 + 17470457-17470613,17470696-17470789,17471069-174711... 29 4.0
12_02_1282 + 27528159-27529148,27529549-27529614 29 5.2
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 29 5.2
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 29 5.2
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 29 5.2
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 29 5.2
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 29 5.2
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 29 5.2
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 29 5.2
11_04_0232 + 15163347-15163952 28 6.9
05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82... 28 9.2
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 28 9.2
>06_01_0213 +
1628974-1629339,1629441-1629590,1630935-1631095,
1631178-1631892,1632045-1632091,1632295-1632316
Length = 486
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 631 EPSPLQITAKFVPALSLIAKTCASPVSSLVYPYPY 527
EPS + IT+ PA+ +++ A P ++ + P PY
Sbjct: 189 EPSQVVITSGATPAMEILSFCLADPGNAFLVPSPY 223
>05_04_0044 +
17470457-17470613,17470696-17470789,17471069-17471132,
17471378-17471477,17472027-17472085,17472572-17472647,
17472761-17472832,17473788-17473932,17474044-17474299,
17475190-17475305,17475503-17475723,17475996-17476024,
17476622-17476740,17476828-17477023,17477242-17477250
Length = 570
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 277 DLLSAEHA*FDISYIRYRDAKFPHQAKCSNQFYQPF 170
+L + H+ F + ++ + D P Q K S Q+Y F
Sbjct: 521 ELFAGYHSPFGLHHVDFEDPSLPRQPKLSAQWYSKF 556
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 157 GDGVSHTVPIYEGYTLPHAILRLDLAGR 184
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 205 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 288
G+G SH Y+ Y HA L DLAG+
Sbjct: 158 GDGVSHTVPIYEGYALPHAILRLDLAGR 185
>11_04_0232 + 15163347-15163952
Length = 201
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 463 SAYCTQTHPPLQRTSPLPIKPDMDMDTPEKKPAMHR-SW----QLMTELVQILQLSVTAT 627
S Y Q P+ R+SP+P+K + + ++ + R W +L +E+++I S+T T
Sbjct: 85 SNYSCQKSAPVLRSSPMPLKEILFKEMQQELTTIMRDEWLREVELSSEVIRINTPSLTIT 144
Query: 628 AL 633
L
Sbjct: 145 CL 146
>05_01_0119 +
820566-820739,822708-822737,823153-823266,823341-823433,
823521-823586,824076-824174,824480-824559,825039-825151,
825600-825688,825955-826041,826128-826130,826285-826383
Length = 348
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 706 YGNTVRFSKYSILIAYSNR*HSKTREPSPLQITAKFVPALSLIAKTCASPVSSLV 542
YG F +YS+ + + NR + T L + K + ++ + K C VS+++
Sbjct: 76 YGAEKEFFRYSLFLVFCNRITTSTVSALVLTASKKSLDPVAPLQKYCVVSVSNIL 130
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 175 VDKTDSNTSLGEGTSHLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGL 330
V T+ ++S G+ L+ + + Q+ D+ G+ ++KDS +A+GL
Sbjct: 209 VSDTEQSSSYSSGS--LFGKLEGTQSQGYSANNDIFGRFRATSKDSSQADGL 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,179,472
Number of Sequences: 37544
Number of extensions: 353750
Number of successful extensions: 881
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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