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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10k03
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY258907-1|AAP13531.1|  179|Homo sapiens transcription factor NF...    33   1.5  
AK126872-1|BAC86731.1|  487|Homo sapiens protein ( Homo sapiens ...    31   4.5  
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated...    30   7.8  
BC139782-1|AAI39783.1|  526|Homo sapiens XIRP1 protein protein.        30   7.8  
BC127119-1|AAI27120.1|  526|Homo sapiens XIRP1 protein protein.        30   7.8  
AY375160-1|AAQ64003.1| 1843|Homo sapiens cardiomyopathy associat...    30   7.8  
AL713648-1|CAD28459.1| 1059|Homo sapiens hypothetical protein pr...    30   7.8  
AK126299-1|BAC86519.1| 1358|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AK096421-1|BAC04783.1|  526|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AJ626900-1|CAF25192.1| 1843|Homo sapiens Xin A protein.                30   7.8  

>AY258907-1|AAP13531.1|  179|Homo sapiens transcription factor NF-E4
           protein.
          Length = 179

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/36 (36%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +1

Query: 469 YCTQTHPPLQRTSPLPIKPDMDMD-TPEKKPAMHRS 573
           + +Q++PP + +S LP+K D  ++ TP++ P++H S
Sbjct: 142 FLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLS 177


>AK126872-1|BAC86731.1|  487|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44924 fis, clone BRAMY3014555. ).
          Length = 487

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 475 TQTHPPLQRTSPLPIKPDMDMDTPEKKPAMHRSWQLMTELVQILQLSVTAT 627
           T THPP +    LP+  ++ + TP +  A H     +T  VQ L L +T T
Sbjct: 235 TPTHPPKKVVPQLPVYQEVTIPTPGQDQAQHPMSPSIT--VQPLDLGLTIT 283


>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
            protein protein.
          Length = 5005

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 484  HPPLQRTSPLPIKPDMDMDTPEKKPAMHRSWQLMTELVQILQLSVTATAL 633
            HP  +RTS   +   +D+DTP  + +     QL     ++++  +TA +L
Sbjct: 1519 HPTNKRTSKSSLHRPLDLDTPTSEESSSSFEQLSVPTFKVIKQGLTANSL 1568


>BC139782-1|AAI39783.1|  526|Homo sapiens XIRP1 protein protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466 AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
           A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 14  AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 43


>BC127119-1|AAI27120.1|  526|Homo sapiens XIRP1 protein protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466 AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
           A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 14  AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 43


>AY375160-1|AAQ64003.1| 1843|Homo sapiens cardiomyopathy associated
            protein 1 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466  AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
            A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 1331 AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 1360


>AL713648-1|CAD28459.1| 1059|Homo sapiens hypothetical protein
           protein.
          Length = 1059

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466 AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
           A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 767 AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 796


>AK126299-1|BAC86519.1| 1358|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44319 fis, clone TRACH3000926, moderately
           similar to Mus musculus cardiac morphogenesis (Xin). ).
          Length = 1358

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466 AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
           A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 846 AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 875


>AK096421-1|BAC04783.1|  526|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39102 fis, clone NTONG2002948, moderately
           similar to Mus musculus Xin mRNA. ).
          Length = 526

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466 AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
           A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 14  AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 43


>AJ626900-1|CAF25192.1| 1843|Homo sapiens Xin A protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 466  AYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 555
            A+ TQ+HPP +   PLP+ P    +  +++
Sbjct: 1331 AHLTQSHPPQRLPKPLPLSPSFSSEVGQRE 1360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,740,465
Number of Sequences: 237096
Number of extensions: 2086095
Number of successful extensions: 8292
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8292
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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