Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10k02
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 266 6e-71
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 266 6e-71
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 266 6e-71
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 257 3e-68
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 257 3e-68
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 257 3e-68
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 257 3e-68
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 256 5e-68
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 171 2e-42
BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein. 59 2e-08
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 42 0.002
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 42 0.002
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 42 0.002
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 38 0.028
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 38 0.028
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 38 0.028
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 38 0.028
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 38 0.037
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 38 0.037
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 38 0.037
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 1.4
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 1.4
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 1.4
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 1.4
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 2.5
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 2.5
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 2.5
AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like m... 30 9.9
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m... 30 9.9
AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein. 30 9.9
AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protei... 30 9.9
AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protei... 30 9.9
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 30 9.9
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein. 30 9.9
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 266 bits (652), Expect = 6e-71
Identities = 133/219 (60%), Positives = 163/219 (74%), Gaps = 4/219 (1%)
Frame = +2
Query: 86 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 253
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 254 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 433
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 434 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 613
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 614 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKTS 730
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVT 219
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 266 bits (652), Expect = 6e-71
Identities = 133/219 (60%), Positives = 163/219 (74%), Gaps = 4/219 (1%)
Frame = +2
Query: 86 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 253
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 254 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 433
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 434 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 613
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 614 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKTS 730
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVT 219
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 266 bits (652), Expect = 6e-71
Identities = 133/219 (60%), Positives = 163/219 (74%), Gaps = 4/219 (1%)
Frame = +2
Query: 86 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 253
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 254 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 433
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 434 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 613
R A+RALC ITDSTMLQAIERYMKQAIVDK P D+V+RW+NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 614 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKTS 730
AQEA +SD++MV YHAL ++ R+NDRL+ K+I+K +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVT 219
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 257 bits (629), Expect = 3e-68
Identities = 128/212 (60%), Positives = 157/212 (74%), Gaps = 4/212 (1%)
Frame = +2
Query: 101 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 268
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 269 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 448
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 449 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 628
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 629 TSDHVMVSYHALAVVAGARRNDRLSTVKLITK 724
+SD++MV YHAL V+ R+NDRL+ K++ K
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNK 217
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 257 bits (629), Expect = 3e-68
Identities = 128/212 (60%), Positives = 157/212 (74%), Gaps = 4/212 (1%)
Frame = +2
Query: 101 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 268
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 269 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 448
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 449 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 628
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 629 TSDHVMVSYHALAVVAGARRNDRLSTVKLITK 724
+SD++MV YHAL V+ R+NDRL+ K++ K
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNK 217
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 257 bits (629), Expect = 3e-68
Identities = 128/212 (60%), Positives = 157/212 (74%), Gaps = 4/212 (1%)
Frame = +2
Query: 101 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 268
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 269 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 448
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 449 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 628
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 629 TSDHVMVSYHALAVVAGARRNDRLSTVKLITK 724
+SD++MV YHAL V+ R+NDRL+ K++ K
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNK 217
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 257 bits (629), Expect = 3e-68
Identities = 128/212 (60%), Positives = 157/212 (74%), Gaps = 4/212 (1%)
Frame = +2
Query: 101 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 268
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 269 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 448
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 449 RALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAM 628
RALC ITD TMLQAIERYMKQAIVDK D+V+RWINEAQEA
Sbjct: 126 RALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAA 185
Query: 629 TSDHVMVSYHALAVVAGARRNDRLSTVKLITK 724
+SD++MV YHAL V+ R+NDRL+ K++ K
Sbjct: 186 SSDNIMVQYHALGVLYHLRKNDRLAVSKMLNK 217
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 256 bits (628), Expect = 5e-68
Identities = 125/202 (61%), Positives = 152/202 (75%)
Frame = +2
Query: 119 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 298
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 478
LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD T
Sbjct: 70 LFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGT 129
Query: 479 MLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYH 658
MLQAIERYMKQAIVDK D+V+RWINEAQEA +SD++MV YH
Sbjct: 130 MLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYH 189
Query: 659 ALAVVAGARRNDRLSTVKLITK 724
AL V+ R+NDRL+ K++ K
Sbjct: 190 ALGVLYHLRKNDRLAVSKMLNK 211
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 171 bits (417), Expect = 2e-42
Identities = 86/144 (59%), Positives = 104/144 (72%)
Frame = +2
Query: 293 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 472
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 473 STMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVS 652
TMLQAIERYMKQAIVDK D+V+RWINEAQEA +SD++MV
Sbjct: 62 GTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQ 121
Query: 653 YHALAVVAGARRNDRLSTVKLITK 724
YHAL V+ R+NDRL+ K++ K
Sbjct: 122 YHALGVLYHLRKNDRLAVSKMLNK 145
>BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein.
Length = 699
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = +2
Query: 599 RWINEAQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKTS 730
RW+NEAQEA +SD++MV YHAL ++ R+NDRL+ K+I+K +
Sbjct: 1 RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVT 44
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 209 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 385
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 386 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 523
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 209 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 385
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 386 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 523
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 209 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 385
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 386 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 523
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 209 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 385
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 386 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 523
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 209 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 385
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 63 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 117
Query: 386 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 523
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 118 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 159
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 38.3 bits (85), Expect = 0.028
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.028
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.028
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 38.3 bits (85), Expect = 0.028
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 439
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 440 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 532
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 466
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 466
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 466
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 466
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 460
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 460
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 299 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 460
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
>AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 1 protein.
Length = 1892
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
microcephaly-associated protein protein.
Length = 3477
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein.
Length = 583
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 463 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 522
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 523 LNLKKKTDLSIFRTPI 538
>AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protein
ASP protein.
Length = 825
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protein
ASP protein.
Length = 826
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
Length = 3477
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 89 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 253
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 254 LTTQEATDIFFATTKL 301
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,094,895
Number of Sequences: 237096
Number of extensions: 2269738
Number of successful extensions: 4514
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4505
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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